Gene : Medtr3g088630 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR26402//PTHR26402:SF498 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM Description:  two-component response regulator ARR3-like protein
Genomic Order:  4663 Name:  ? Medtr3g088630
Secondary Identifier:  ? PAC:31053172
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g088630 0.5kb upstream 0.5kb upstream 4380 true chr3: 40027258-40031637 Medicago truncatula
Medtr3g088630 0.5kb upstream 0.5kb upstream 500 false chr3: 40031138-40031637 Medicago truncatula
Medtr3g088630 0.5kb downstream 0.5kb downstream 4380 true chr3: 40026758-40031137 Medicago truncatula
Medtr3g088630 0.5kb downstream 0.5kb downstream 500 false chr3: 40026758-40027257 Medicago truncatula
Medtr3g088630 1.0kb upstream 1.0kb upstream 4880 true chr3: 40027258-40032137 Medicago truncatula
Medtr3g088630 1.0kb upstream 1.0kb upstream 1000 false chr3: 40031138-40032137 Medicago truncatula
Medtr3g088630 1.0kb downstream 1.0kb downstream 4880 true chr3: 40026258-40031137 Medicago truncatula
Medtr3g088630 1.0kb downstream 1.0kb downstream 1000 false chr3: 40026258-40027257 Medicago truncatula
Medtr3g088630 2.0kb upstream 2.0kb upstream 5880 true chr3: 40027258-40033137 Medicago truncatula
Medtr3g088630 2.0kb upstream 2.0kb upstream 2000 false chr3: 40031138-40033137 Medicago truncatula
Medtr3g088630 2.0kb downstream 2.0kb downstream 5880 true chr3: 40025258-40031137 Medicago truncatula
Medtr3g088630 2.0kb downstream 2.0kb downstream 2000 false chr3: 40025258-40027257 Medicago truncatula
Medtr3g088630 5.0kb upstream 5.0kb upstream 8880 true chr3: 40027258-40036137 Medicago truncatula
Medtr3g088630 5.0kb upstream 5.0kb upstream 5000 false chr3: 40031138-40036137 Medicago truncatula
Medtr3g088630 5.0kb downstream 5.0kb downstream 8880 true chr3: 40022258-40031137 Medicago truncatula
Medtr3g088630 5.0kb downstream 5.0kb downstream 5000 false chr3: 40022258-40027257 Medicago truncatula
Medtr3g088630 10.0kb upstream 10.0kb upstream 13880 true chr3: 40027258-40041137 Medicago truncatula
Medtr3g088630 10.0kb upstream 10.0kb upstream 10000 false chr3: 40031138-40041137 Medicago truncatula
Medtr3g088630 10.0kb downstream 10.0kb downstream 13880 true chr3: 40017258-40031137 Medicago truncatula
Medtr3g088630 10.0kb downstream 10.0kb downstream 10000 false chr3: 40017258-40027257 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791997 5273 Angiosperm View MSA
122303306 5265 Fabidae View MSA
124070337 5270 Rosid View MSA
123744079 5271 Pentapetalae View MSA
122795833 5272 Eudicot View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.688        
cufflinks 4.481        
cufflinks 7.381       High
cufflinks 0.367        
cufflinks 10.063       High
cufflinks 0.372        
cufflinks 0.283       Low
cufflinks 6.089        
cufflinks 0.381        

0 Strain