Gene : Medtr3g118250 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11807:SF12 - CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 1 Description:  cytoplasmic tRNA 2-thiolation protein
Genomic Order:  6733 Name:  ? Medtr3g118250
Secondary Identifier:  ? PAC:31055602
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g118250 0.5kb upstream 0.5kb upstream 2532 true chr3: 55354746-55357277 Medicago truncatula
Medtr3g118250 0.5kb upstream 0.5kb upstream 500 false chr3: 55354746-55355245 Medicago truncatula
Medtr3g118250 0.5kb downstream 0.5kb downstream 2532 true chr3: 55355246-55357777 Medicago truncatula
Medtr3g118250 0.5kb downstream 0.5kb downstream 500 false chr3: 55357278-55357777 Medicago truncatula
Medtr3g118250 1.0kb upstream 1.0kb upstream 3032 true chr3: 55354246-55357277 Medicago truncatula
Medtr3g118250 1.0kb upstream 1.0kb upstream 1000 false chr3: 55354246-55355245 Medicago truncatula
Medtr3g118250 1.0kb downstream 1.0kb downstream 3032 true chr3: 55355246-55358277 Medicago truncatula
Medtr3g118250 1.0kb downstream 1.0kb downstream 1000 false chr3: 55357278-55358277 Medicago truncatula
Medtr3g118250 2.0kb upstream 2.0kb upstream 4032 true chr3: 55353246-55357277 Medicago truncatula
Medtr3g118250 2.0kb upstream 2.0kb upstream 2000 false chr3: 55353246-55355245 Medicago truncatula
Medtr3g118250 2.0kb downstream 2.0kb downstream 4032 true chr3: 55355246-55359277 Medicago truncatula
Medtr3g118250 2.0kb downstream 2.0kb downstream 2000 false chr3: 55357278-55359277 Medicago truncatula
Medtr3g118250 5.0kb upstream 5.0kb upstream 7032 true chr3: 55350246-55357277 Medicago truncatula
Medtr3g118250 5.0kb upstream 5.0kb upstream 5000 false chr3: 55350246-55355245 Medicago truncatula
Medtr3g118250 5.0kb downstream 5.0kb downstream 7032 true chr3: 55355246-55362277 Medicago truncatula
Medtr3g118250 5.0kb downstream 5.0kb downstream 5000 false chr3: 55357278-55362277 Medicago truncatula
Medtr3g118250 10.0kb upstream 10.0kb upstream 12032 true chr3: 55345246-55357277 Medicago truncatula
Medtr3g118250 10.0kb upstream 10.0kb upstream 10000 false chr3: 55345246-55355245 Medicago truncatula
Medtr3g118250 10.0kb downstream 10.0kb downstream 12032 true chr3: 55355246-55367277 Medicago truncatula
Medtr3g118250 10.0kb downstream 10.0kb downstream 10000 false chr3: 55357278-55367277 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302753 5265 Fabidae View MSA
124064054 5270 Rosid View MSA
123742084 5271 Pentapetalae View MSA
122790612 5272 Eudicot View MSA
122048376 5273 Angiosperm View MSA
121346123 5274 Embryophyte View MSA
123424890 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.55        
cufflinks 13.74     High  
cufflinks 15.03     High  
cufflinks 4.203       Low
cufflinks 15.123     High  
cufflinks 3.442       Low
cufflinks 9.373        
cufflinks 14.751     High  
cufflinks 8.82        

0 Strain