Gene : Medtr3g118110 M. truncatula Mt4.0v1
Defline:  (1 of 2) KOG3392 - Exon-exon junction complex, Magoh component Description:  mago nashi family, integral exon junction complex protein
Genomic Order:  6723 Name:  ? Medtr3g118110
Secondary Identifier:  ? PAC:31054028
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g118110 0.5kb upstream 0.5kb upstream 2150 true chr3: 55279093-55281242 Medicago truncatula
Medtr3g118110 0.5kb upstream 0.5kb upstream 500 false chr3: 55279093-55279592 Medicago truncatula
Medtr3g118110 0.5kb downstream 0.5kb downstream 2150 true chr3: 55279593-55281742 Medicago truncatula
Medtr3g118110 0.5kb downstream 0.5kb downstream 500 false chr3: 55281243-55281742 Medicago truncatula
Medtr3g118110 1.0kb upstream 1.0kb upstream 2650 true chr3: 55278593-55281242 Medicago truncatula
Medtr3g118110 1.0kb upstream 1.0kb upstream 1000 false chr3: 55278593-55279592 Medicago truncatula
Medtr3g118110 1.0kb downstream 1.0kb downstream 2650 true chr3: 55279593-55282242 Medicago truncatula
Medtr3g118110 1.0kb downstream 1.0kb downstream 1000 false chr3: 55281243-55282242 Medicago truncatula
Medtr3g118110 2.0kb upstream 2.0kb upstream 3650 true chr3: 55277593-55281242 Medicago truncatula
Medtr3g118110 2.0kb upstream 2.0kb upstream 2000 false chr3: 55277593-55279592 Medicago truncatula
Medtr3g118110 2.0kb downstream 2.0kb downstream 3650 true chr3: 55279593-55283242 Medicago truncatula
Medtr3g118110 2.0kb downstream 2.0kb downstream 2000 false chr3: 55281243-55283242 Medicago truncatula
Medtr3g118110 5.0kb upstream 5.0kb upstream 6650 true chr3: 55274593-55281242 Medicago truncatula
Medtr3g118110 5.0kb upstream 5.0kb upstream 5000 false chr3: 55274593-55279592 Medicago truncatula
Medtr3g118110 5.0kb downstream 5.0kb downstream 6650 true chr3: 55279593-55286242 Medicago truncatula
Medtr3g118110 5.0kb downstream 5.0kb downstream 5000 false chr3: 55281243-55286242 Medicago truncatula
Medtr3g118110 10.0kb upstream 10.0kb upstream 11650 true chr3: 55269593-55281242 Medicago truncatula
Medtr3g118110 10.0kb upstream 10.0kb upstream 10000 false chr3: 55269593-55279592 Medicago truncatula
Medtr3g118110 10.0kb downstream 10.0kb downstream 11650 true chr3: 55279593-55291242 Medicago truncatula
Medtr3g118110 10.0kb downstream 10.0kb downstream 10000 false chr3: 55281243-55291242 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303445 5265 Fabidae View MSA
124066056 5270 Rosid View MSA
123753775 5271 Pentapetalae View MSA
122786984 5272 Eudicot View MSA
122044981 5273 Angiosperm View MSA
121347461 5274 Embryophyte View MSA
123426224 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.571     High Low
cufflinks 16.611     High  
cufflinks 15.712     High  
cufflinks 20.701     High  
cufflinks 20.741     High  
cufflinks 14.319     High  
cufflinks 23.398     High High
cufflinks 15.129     High  
cufflinks 25.508     High High

0 Strain