Gene : Medtr3g118090 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR31742:SF1 - RPA-INTERACTING PROTEIN Description:  hypothetical protein
Genomic Order:  6721 Name:  ? Medtr3g118090
Secondary Identifier:  ? PAC:31061581
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g118090 0.5kb upstream 0.5kb upstream 3555 true chr3: 55269504-55273058 Medicago truncatula
Medtr3g118090 0.5kb upstream 0.5kb upstream 500 false chr3: 55272559-55273058 Medicago truncatula
Medtr3g118090 0.5kb downstream 0.5kb downstream 3555 true chr3: 55269004-55272558 Medicago truncatula
Medtr3g118090 0.5kb downstream 0.5kb downstream 500 false chr3: 55269004-55269503 Medicago truncatula
Medtr3g118090 1.0kb upstream 1.0kb upstream 4055 true chr3: 55269504-55273558 Medicago truncatula
Medtr3g118090 1.0kb upstream 1.0kb upstream 1000 false chr3: 55272559-55273558 Medicago truncatula
Medtr3g118090 1.0kb downstream 1.0kb downstream 4055 true chr3: 55268504-55272558 Medicago truncatula
Medtr3g118090 1.0kb downstream 1.0kb downstream 1000 false chr3: 55268504-55269503 Medicago truncatula
Medtr3g118090 2.0kb upstream 2.0kb upstream 5055 true chr3: 55269504-55274558 Medicago truncatula
Medtr3g118090 2.0kb upstream 2.0kb upstream 2000 false chr3: 55272559-55274558 Medicago truncatula
Medtr3g118090 2.0kb downstream 2.0kb downstream 5055 true chr3: 55267504-55272558 Medicago truncatula
Medtr3g118090 2.0kb downstream 2.0kb downstream 2000 false chr3: 55267504-55269503 Medicago truncatula
Medtr3g118090 5.0kb upstream 5.0kb upstream 8055 true chr3: 55269504-55277558 Medicago truncatula
Medtr3g118090 5.0kb upstream 5.0kb upstream 5000 false chr3: 55272559-55277558 Medicago truncatula
Medtr3g118090 5.0kb downstream 5.0kb downstream 8055 true chr3: 55264504-55272558 Medicago truncatula
Medtr3g118090 5.0kb downstream 5.0kb downstream 5000 false chr3: 55264504-55269503 Medicago truncatula
Medtr3g118090 10.0kb upstream 10.0kb upstream 13055 true chr3: 55269504-55282558 Medicago truncatula
Medtr3g118090 10.0kb upstream 10.0kb upstream 10000 false chr3: 55272559-55282558 Medicago truncatula
Medtr3g118090 10.0kb downstream 10.0kb downstream 13055 true chr3: 55259504-55272558 Medicago truncatula
Medtr3g118090 10.0kb downstream 10.0kb downstream 10000 false chr3: 55259504-55269503 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299446 5265 Fabidae View MSA
124061489 5270 Rosid View MSA
123739858 5271 Pentapetalae View MSA
122789905 5272 Eudicot View MSA
122044802 5273 Angiosperm View MSA
121346952 5274 Embryophyte View MSA
123424751 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.252        
cufflinks 1.087        
cufflinks 1.152        
cufflinks 0.666       Low
cufflinks 1.332        
cufflinks 0.735       Low
cufflinks 1.428       High
cufflinks 1.083        
cufflinks 0.71       Low

0 Strain