Gene : Medtr3g118070 M. truncatula Mt4.0v1
Defline:  (1 of 1) 5.4.3.8 - Glutamate-1-semialdehyde 2,1-aminomutase / Glutamate-1-semialdehyde aminotransferase Description:  glutamate-1-semialdehyde 2,1-aminomutase
Genomic Order:  6720 Name:  ? Medtr3g118070
Secondary Identifier:  ? PAC:31056678
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-5188 Medicago truncatula pathologic  
Mtruncatula PWY-5918 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g118070 0.5kb upstream 0.5kb upstream 2400 true chr3: 55264564-55266963 Medicago truncatula
Medtr3g118070 0.5kb upstream 0.5kb upstream 500 false chr3: 55264564-55265063 Medicago truncatula
Medtr3g118070 0.5kb downstream 0.5kb downstream 2400 true chr3: 55265064-55267463 Medicago truncatula
Medtr3g118070 0.5kb downstream 0.5kb downstream 500 false chr3: 55266964-55267463 Medicago truncatula
Medtr3g118070 1.0kb upstream 1.0kb upstream 2900 true chr3: 55264064-55266963 Medicago truncatula
Medtr3g118070 1.0kb upstream 1.0kb upstream 1000 false chr3: 55264064-55265063 Medicago truncatula
Medtr3g118070 1.0kb downstream 1.0kb downstream 2900 true chr3: 55265064-55267963 Medicago truncatula
Medtr3g118070 1.0kb downstream 1.0kb downstream 1000 false chr3: 55266964-55267963 Medicago truncatula
Medtr3g118070 2.0kb upstream 2.0kb upstream 3900 true chr3: 55263064-55266963 Medicago truncatula
Medtr3g118070 2.0kb upstream 2.0kb upstream 2000 false chr3: 55263064-55265063 Medicago truncatula
Medtr3g118070 2.0kb downstream 2.0kb downstream 3900 true chr3: 55265064-55268963 Medicago truncatula
Medtr3g118070 2.0kb downstream 2.0kb downstream 2000 false chr3: 55266964-55268963 Medicago truncatula
Medtr3g118070 5.0kb upstream 5.0kb upstream 6900 true chr3: 55260064-55266963 Medicago truncatula
Medtr3g118070 5.0kb upstream 5.0kb upstream 5000 false chr3: 55260064-55265063 Medicago truncatula
Medtr3g118070 5.0kb downstream 5.0kb downstream 6900 true chr3: 55265064-55271963 Medicago truncatula
Medtr3g118070 5.0kb downstream 5.0kb downstream 5000 false chr3: 55266964-55271963 Medicago truncatula
Medtr3g118070 10.0kb upstream 10.0kb upstream 11900 true chr3: 55255064-55266963 Medicago truncatula
Medtr3g118070 10.0kb upstream 10.0kb upstream 10000 false chr3: 55255064-55265063 Medicago truncatula
Medtr3g118070 10.0kb downstream 10.0kb downstream 11900 true chr3: 55265064-55276963 Medicago truncatula
Medtr3g118070 10.0kb downstream 10.0kb downstream 10000 false chr3: 55266964-55276963 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307650 5265 Fabidae View MSA
124066610 5270 Rosid View MSA
123741000 5271 Pentapetalae View MSA
122796730 5272 Eudicot View MSA
122042723 5273 Angiosperm View MSA
121344584 5274 Embryophyte View MSA
123423890 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.065     High Low
cufflinks 51.541     High  
cufflinks 48.819     High  
cufflinks 43.294     High  
cufflinks 73.077     High High
cufflinks 20.338     High  
cufflinks 11.43     High Low
cufflinks 56.59     High  
cufflinks 14.311     High  

0 Strain