Gene : Medtr3g118010 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR19139:SF152 - AQUAPORIN PIP2-7 Description:  major intrinsic protein (MIP) family transporter
Genomic Order:  6715 Name:  ? Medtr3g118010
Secondary Identifier:  ? PAC:31056378
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g118010 0.5kb upstream 0.5kb upstream 1741 true chr3: 55219827-55221567 Medicago truncatula
Medtr3g118010 0.5kb upstream 0.5kb upstream 500 false chr3: 55219827-55220326 Medicago truncatula
Medtr3g118010 0.5kb downstream 0.5kb downstream 1741 true chr3: 55220327-55222067 Medicago truncatula
Medtr3g118010 0.5kb downstream 0.5kb downstream 500 false chr3: 55221568-55222067 Medicago truncatula
Medtr3g118010 1.0kb upstream 1.0kb upstream 2241 true chr3: 55219327-55221567 Medicago truncatula
Medtr3g118010 1.0kb upstream 1.0kb upstream 1000 false chr3: 55219327-55220326 Medicago truncatula
Medtr3g118010 1.0kb downstream 1.0kb downstream 2241 true chr3: 55220327-55222567 Medicago truncatula
Medtr3g118010 1.0kb downstream 1.0kb downstream 1000 false chr3: 55221568-55222567 Medicago truncatula
Medtr3g118010 2.0kb upstream 2.0kb upstream 3241 true chr3: 55218327-55221567 Medicago truncatula
Medtr3g118010 2.0kb upstream 2.0kb upstream 2000 false chr3: 55218327-55220326 Medicago truncatula
Medtr3g118010 2.0kb downstream 2.0kb downstream 3241 true chr3: 55220327-55223567 Medicago truncatula
Medtr3g118010 2.0kb downstream 2.0kb downstream 2000 false chr3: 55221568-55223567 Medicago truncatula
Medtr3g118010 5.0kb upstream 5.0kb upstream 6241 true chr3: 55215327-55221567 Medicago truncatula
Medtr3g118010 5.0kb upstream 5.0kb upstream 5000 false chr3: 55215327-55220326 Medicago truncatula
Medtr3g118010 5.0kb downstream 5.0kb downstream 6241 true chr3: 55220327-55226567 Medicago truncatula
Medtr3g118010 5.0kb downstream 5.0kb downstream 5000 false chr3: 55221568-55226567 Medicago truncatula
Medtr3g118010 10.0kb upstream 10.0kb upstream 11241 true chr3: 55210327-55221567 Medicago truncatula
Medtr3g118010 10.0kb upstream 10.0kb upstream 10000 false chr3: 55210327-55220326 Medicago truncatula
Medtr3g118010 10.0kb downstream 10.0kb downstream 11241 true chr3: 55220327-55231567 Medicago truncatula
Medtr3g118010 10.0kb downstream 10.0kb downstream 10000 false chr3: 55221568-55231567 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306417 5265 Fabidae View MSA
124063873 5270 Rosid View MSA
123739725 5271 Pentapetalae View MSA
122787809 5272 Eudicot View MSA
122045660 5273 Angiosperm View MSA
121349621 5274 Embryophyte View MSA
123428679 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.629        
cufflinks 0.988        
cufflinks 0.658        
cufflinks 1.448        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.311       Low
cufflinks 1.425        
cufflinks 1.582        

0 Strain