Gene : Medtr3g118520 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.4.1.101 - Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase / 1,2-N-acetylglucosaminyltransferase Description:  N-acetylglucosaminyltransferase I
Genomic Order:  6752 Name:  ? Medtr3g118520
Secondary Identifier:  ? PAC:31060371
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-7426 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g118520 0.5kb upstream 0.5kb upstream 8335 true chr3: 55456796-55465130 Medicago truncatula
Medtr3g118520 0.5kb upstream 0.5kb upstream 500 false chr3: 55456796-55457295 Medicago truncatula
Medtr3g118520 0.5kb downstream 0.5kb downstream 8335 true chr3: 55457296-55465630 Medicago truncatula
Medtr3g118520 0.5kb downstream 0.5kb downstream 500 false chr3: 55465131-55465630 Medicago truncatula
Medtr3g118520 1.0kb upstream 1.0kb upstream 8835 true chr3: 55456296-55465130 Medicago truncatula
Medtr3g118520 1.0kb upstream 1.0kb upstream 1000 false chr3: 55456296-55457295 Medicago truncatula
Medtr3g118520 1.0kb downstream 1.0kb downstream 8835 true chr3: 55457296-55466130 Medicago truncatula
Medtr3g118520 1.0kb downstream 1.0kb downstream 1000 false chr3: 55465131-55466130 Medicago truncatula
Medtr3g118520 2.0kb upstream 2.0kb upstream 9835 true chr3: 55455296-55465130 Medicago truncatula
Medtr3g118520 2.0kb upstream 2.0kb upstream 2000 false chr3: 55455296-55457295 Medicago truncatula
Medtr3g118520 2.0kb downstream 2.0kb downstream 9835 true chr3: 55457296-55467130 Medicago truncatula
Medtr3g118520 2.0kb downstream 2.0kb downstream 2000 false chr3: 55465131-55467130 Medicago truncatula
Medtr3g118520 5.0kb upstream 5.0kb upstream 12835 true chr3: 55452296-55465130 Medicago truncatula
Medtr3g118520 5.0kb upstream 5.0kb upstream 5000 false chr3: 55452296-55457295 Medicago truncatula
Medtr3g118520 5.0kb downstream 5.0kb downstream 12835 true chr3: 55457296-55470130 Medicago truncatula
Medtr3g118520 5.0kb downstream 5.0kb downstream 5000 false chr3: 55465131-55470130 Medicago truncatula
Medtr3g118520 10.0kb upstream 10.0kb upstream 17835 true chr3: 55447296-55465130 Medicago truncatula
Medtr3g118520 10.0kb upstream 10.0kb upstream 10000 false chr3: 55447296-55457295 Medicago truncatula
Medtr3g118520 10.0kb downstream 10.0kb downstream 17835 true chr3: 55457296-55475130 Medicago truncatula
Medtr3g118520 10.0kb downstream 10.0kb downstream 10000 false chr3: 55465131-55475130 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122260850 5265 Fabidae Singleton cluster - no MSA
124064877 5270 Rosid View MSA
123753422 5271 Pentapetalae View MSA
122787194 5272 Eudicot View MSA
122050416 5273 Angiosperm View MSA
121350019 5274 Embryophyte View MSA
123426685 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.752        
cufflinks 1.526        
cufflinks 1.649        
cufflinks 0.467       Low
cufflinks 2.031       High
cufflinks 0.328       Low
cufflinks 0.895        
cufflinks 1.33        
cufflinks 0.723        

0 Strain