Gene : Medtr3g435540 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22835//PTHR22835:SF267 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Description:  GDSL-like lipase/acylhydrolase
Genomic Order:  1367 Name:  ? Medtr3g435540
Secondary Identifier:  ? PAC:31060793
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula LIPAS-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g435540 0.5kb upstream 0.5kb upstream 4596 true chr3: 11665026-11669621 Medicago truncatula
Medtr3g435540 0.5kb upstream 0.5kb upstream 500 false chr3: 11669122-11669621 Medicago truncatula
Medtr3g435540 0.5kb downstream 0.5kb downstream 4596 true chr3: 11664526-11669121 Medicago truncatula
Medtr3g435540 0.5kb downstream 0.5kb downstream 500 false chr3: 11664526-11665025 Medicago truncatula
Medtr3g435540 1.0kb upstream 1.0kb upstream 5096 true chr3: 11665026-11670121 Medicago truncatula
Medtr3g435540 1.0kb upstream 1.0kb upstream 1000 false chr3: 11669122-11670121 Medicago truncatula
Medtr3g435540 1.0kb downstream 1.0kb downstream 5096 true chr3: 11664026-11669121 Medicago truncatula
Medtr3g435540 1.0kb downstream 1.0kb downstream 1000 false chr3: 11664026-11665025 Medicago truncatula
Medtr3g435540 2.0kb upstream 2.0kb upstream 6096 true chr3: 11665026-11671121 Medicago truncatula
Medtr3g435540 2.0kb upstream 2.0kb upstream 2000 false chr3: 11669122-11671121 Medicago truncatula
Medtr3g435540 2.0kb downstream 2.0kb downstream 6096 true chr3: 11663026-11669121 Medicago truncatula
Medtr3g435540 2.0kb downstream 2.0kb downstream 2000 false chr3: 11663026-11665025 Medicago truncatula
Medtr3g435540 5.0kb upstream 5.0kb upstream 9096 true chr3: 11665026-11674121 Medicago truncatula
Medtr3g435540 5.0kb upstream 5.0kb upstream 5000 false chr3: 11669122-11674121 Medicago truncatula
Medtr3g435540 5.0kb downstream 5.0kb downstream 9096 true chr3: 11660026-11669121 Medicago truncatula
Medtr3g435540 5.0kb downstream 5.0kb downstream 5000 false chr3: 11660026-11665025 Medicago truncatula
Medtr3g435540 10.0kb upstream 10.0kb upstream 14096 true chr3: 11665026-11679121 Medicago truncatula
Medtr3g435540 10.0kb upstream 10.0kb upstream 10000 false chr3: 11669122-11679121 Medicago truncatula
Medtr3g435540 10.0kb downstream 10.0kb downstream 14096 true chr3: 11655026-11669121 Medicago truncatula
Medtr3g435540 10.0kb downstream 10.0kb downstream 10000 false chr3: 11655026-11665025 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300197 5265 Fabidae View MSA
124065806 5270 Rosid View MSA
123747165 5271 Pentapetalae View MSA
122791413 5272 Eudicot View MSA
122042370 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.061     Low Low
cufflinks 0.128        
cufflinks 0.102        
cufflinks 1.17       High
cufflinks 0.317        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.366       High
cufflinks 0.088        
cufflinks 0.493        

0 Strain