Gene : Medtr3g435460 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21649:SF17 - CHLOROPHYLL A-B BINDING PROTEIN 4, CHLOROPLASTIC Description:  light-harvesting complex I chlorophyll A/B-binding protein
Genomic Order:  1363 Name:  ? Medtr3g435460
Secondary Identifier:  ? PAC:31059913
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g435460 0.5kb upstream 0.5kb upstream 3635 true chr3: 11609638-11613272 Medicago truncatula
Medtr3g435460 0.5kb upstream 0.5kb upstream 500 false chr3: 11609638-11610137 Medicago truncatula
Medtr3g435460 0.5kb downstream 0.5kb downstream 3635 true chr3: 11610138-11613772 Medicago truncatula
Medtr3g435460 0.5kb downstream 0.5kb downstream 500 false chr3: 11613273-11613772 Medicago truncatula
Medtr3g435460 1.0kb upstream 1.0kb upstream 4135 true chr3: 11609138-11613272 Medicago truncatula
Medtr3g435460 1.0kb upstream 1.0kb upstream 1000 false chr3: 11609138-11610137 Medicago truncatula
Medtr3g435460 1.0kb downstream 1.0kb downstream 4135 true chr3: 11610138-11614272 Medicago truncatula
Medtr3g435460 1.0kb downstream 1.0kb downstream 1000 false chr3: 11613273-11614272 Medicago truncatula
Medtr3g435460 2.0kb upstream 2.0kb upstream 5135 true chr3: 11608138-11613272 Medicago truncatula
Medtr3g435460 2.0kb upstream 2.0kb upstream 2000 false chr3: 11608138-11610137 Medicago truncatula
Medtr3g435460 2.0kb downstream 2.0kb downstream 5135 true chr3: 11610138-11615272 Medicago truncatula
Medtr3g435460 2.0kb downstream 2.0kb downstream 2000 false chr3: 11613273-11615272 Medicago truncatula
Medtr3g435460 5.0kb upstream 5.0kb upstream 8135 true chr3: 11605138-11613272 Medicago truncatula
Medtr3g435460 5.0kb upstream 5.0kb upstream 5000 false chr3: 11605138-11610137 Medicago truncatula
Medtr3g435460 5.0kb downstream 5.0kb downstream 8135 true chr3: 11610138-11618272 Medicago truncatula
Medtr3g435460 5.0kb downstream 5.0kb downstream 5000 false chr3: 11613273-11618272 Medicago truncatula
Medtr3g435460 10.0kb upstream 10.0kb upstream 13135 true chr3: 11600138-11613272 Medicago truncatula
Medtr3g435460 10.0kb upstream 10.0kb upstream 10000 false chr3: 11600138-11610137 Medicago truncatula
Medtr3g435460 10.0kb downstream 10.0kb downstream 13135 true chr3: 11610138-11623272 Medicago truncatula
Medtr3g435460 10.0kb downstream 10.0kb downstream 10000 false chr3: 11613273-11623272 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313401 5265 Fabidae View MSA
124068607 5270 Rosid View MSA
123738583 5271 Pentapetalae View MSA
122789063 5272 Eudicot View MSA
122041547 5273 Angiosperm View MSA
121346524 5274 Embryophyte View MSA
123425939 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.049     Low  
cufflinks 712.946     High High
cufflinks 538.15     High  
cufflinks 0.157        
cufflinks 974.8     High High
cufflinks 0.012     Low Low
cufflinks 0.194        
cufflinks 742.905     High High
cufflinks 0.207        

0 Strain