Gene : Medtr3g437870 M. truncatula Mt4.0v1
Defline:  (1 of 8) PTHR19229//PTHR19229:SF127 - ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA Description:  ABC transporter A family protein
Genomic Order:  1466 Name:  ? Medtr3g437870
Secondary Identifier:  ? PAC:31059435
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g437870 0.5kb upstream 0.5kb upstream 8477 true chr3: 12922696-12931172 Medicago truncatula
Medtr3g437870 0.5kb upstream 0.5kb upstream 500 false chr3: 12930673-12931172 Medicago truncatula
Medtr3g437870 0.5kb downstream 0.5kb downstream 8477 true chr3: 12922196-12930672 Medicago truncatula
Medtr3g437870 0.5kb downstream 0.5kb downstream 500 false chr3: 12922196-12922695 Medicago truncatula
Medtr3g437870 1.0kb upstream 1.0kb upstream 8977 true chr3: 12922696-12931672 Medicago truncatula
Medtr3g437870 1.0kb upstream 1.0kb upstream 1000 false chr3: 12930673-12931672 Medicago truncatula
Medtr3g437870 1.0kb downstream 1.0kb downstream 8977 true chr3: 12921696-12930672 Medicago truncatula
Medtr3g437870 1.0kb downstream 1.0kb downstream 1000 false chr3: 12921696-12922695 Medicago truncatula
Medtr3g437870 2.0kb upstream 2.0kb upstream 9977 true chr3: 12922696-12932672 Medicago truncatula
Medtr3g437870 2.0kb upstream 2.0kb upstream 2000 false chr3: 12930673-12932672 Medicago truncatula
Medtr3g437870 2.0kb downstream 2.0kb downstream 9977 true chr3: 12920696-12930672 Medicago truncatula
Medtr3g437870 2.0kb downstream 2.0kb downstream 2000 false chr3: 12920696-12922695 Medicago truncatula
Medtr3g437870 5.0kb upstream 5.0kb upstream 12977 true chr3: 12922696-12935672 Medicago truncatula
Medtr3g437870 5.0kb upstream 5.0kb upstream 5000 false chr3: 12930673-12935672 Medicago truncatula
Medtr3g437870 5.0kb downstream 5.0kb downstream 12977 true chr3: 12917696-12930672 Medicago truncatula
Medtr3g437870 5.0kb downstream 5.0kb downstream 5000 false chr3: 12917696-12922695 Medicago truncatula
Medtr3g437870 10.0kb upstream 10.0kb upstream 17977 true chr3: 12922696-12940672 Medicago truncatula
Medtr3g437870 10.0kb upstream 10.0kb upstream 10000 false chr3: 12930673-12940672 Medicago truncatula
Medtr3g437870 10.0kb downstream 10.0kb downstream 17977 true chr3: 12912696-12930672 Medicago truncatula
Medtr3g437870 10.0kb downstream 10.0kb downstream 10000 false chr3: 12912696-12922695 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041021 5273 Angiosperm View MSA
122309989 5265 Fabidae View MSA
124064975 5270 Rosid View MSA
123738851 5271 Pentapetalae View MSA
122789582 5272 Eudicot View MSA
123429075 5275 Viridiplantae View MSA
121349830 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.459     High  
cufflinks 0.346       Low
cufflinks 0.673        
cufflinks 9.058     High  
cufflinks 0.86        
cufflinks 11.571     High  
cufflinks 23.688     High High
cufflinks 0.205       Low
cufflinks 8.127        

0 Strain