Gene : Medtr3g450310 M. truncatula Mt4.0v1
Defline:  (1 of 4) PTHR31314:SF10 - HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED Description:  myb-like DNA-binding domain, shaqkyf class protein
Genomic Order:  1828 Name:  ? Medtr3g450310
Secondary Identifier:  ? PAC:31053852
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g450310 0.5kb upstream 0.5kb upstream 4884 true chr3: 17275543-17280426 Medicago truncatula
Medtr3g450310 0.5kb upstream 0.5kb upstream 500 false chr3: 17275543-17276042 Medicago truncatula
Medtr3g450310 0.5kb downstream 0.5kb downstream 4884 true chr3: 17276043-17280926 Medicago truncatula
Medtr3g450310 0.5kb downstream 0.5kb downstream 500 false chr3: 17280427-17280926 Medicago truncatula
Medtr3g450310 1.0kb upstream 1.0kb upstream 5384 true chr3: 17275043-17280426 Medicago truncatula
Medtr3g450310 1.0kb upstream 1.0kb upstream 1000 false chr3: 17275043-17276042 Medicago truncatula
Medtr3g450310 1.0kb downstream 1.0kb downstream 5384 true chr3: 17276043-17281426 Medicago truncatula
Medtr3g450310 1.0kb downstream 1.0kb downstream 1000 false chr3: 17280427-17281426 Medicago truncatula
Medtr3g450310 2.0kb upstream 2.0kb upstream 6384 true chr3: 17274043-17280426 Medicago truncatula
Medtr3g450310 2.0kb upstream 2.0kb upstream 2000 false chr3: 17274043-17276042 Medicago truncatula
Medtr3g450310 2.0kb downstream 2.0kb downstream 6384 true chr3: 17276043-17282426 Medicago truncatula
Medtr3g450310 2.0kb downstream 2.0kb downstream 2000 false chr3: 17280427-17282426 Medicago truncatula
Medtr3g450310 5.0kb upstream 5.0kb upstream 9384 true chr3: 17271043-17280426 Medicago truncatula
Medtr3g450310 5.0kb upstream 5.0kb upstream 5000 false chr3: 17271043-17276042 Medicago truncatula
Medtr3g450310 5.0kb downstream 5.0kb downstream 9384 true chr3: 17276043-17285426 Medicago truncatula
Medtr3g450310 5.0kb downstream 5.0kb downstream 5000 false chr3: 17280427-17285426 Medicago truncatula
Medtr3g450310 10.0kb upstream 10.0kb upstream 14384 true chr3: 17266043-17280426 Medicago truncatula
Medtr3g450310 10.0kb upstream 10.0kb upstream 10000 false chr3: 17266043-17276042 Medicago truncatula
Medtr3g450310 10.0kb downstream 10.0kb downstream 14384 true chr3: 17276043-17290426 Medicago truncatula
Medtr3g450310 10.0kb downstream 10.0kb downstream 10000 false chr3: 17280427-17290426 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300973 5265 Fabidae View MSA
124071403 5270 Rosid View MSA
123742678 5271 Pentapetalae View MSA
122770349 5272 Eudicot View MSA
122049686 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121350891 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.074        
cufflinks 0.173        
cufflinks 0.126        
cufflinks 0.006     Low Low
cufflinks 0.211        
cufflinks 0.209        
cufflinks 0.041     Low  
cufflinks 0.03     Low  
cufflinks 0.047     Low  

0 Strain