Gene : Medtr3g450510 M. truncatula Mt4.0v1
Defline:  (1 of 1) 2.5.1.18//2.5.1.32 - Glutathione transferase / S-(hydroxyalkyl)glutathione lyase // 15-cis-phytoene synthase / PSase Description:  squalene/phytoene synthase
Genomic Order:  1835 Name:  ? Medtr3g450510
Secondary Identifier:  ? PAC:31060048
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CAROTENOID-PWY Medicago truncatula pathologic  
Mtruncatula PWY-6475 Medicago truncatula pathologic  
Mtruncatula PWY-6842 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g450510 0.5kb upstream 0.5kb upstream 3535 true chr3: 17379804-17383338 Medicago truncatula
Medtr3g450510 0.5kb upstream 0.5kb upstream 500 false chr3: 17382839-17383338 Medicago truncatula
Medtr3g450510 0.5kb downstream 0.5kb downstream 3535 true chr3: 17379304-17382838 Medicago truncatula
Medtr3g450510 0.5kb downstream 0.5kb downstream 500 false chr3: 17379304-17379803 Medicago truncatula
Medtr3g450510 1.0kb upstream 1.0kb upstream 4035 true chr3: 17379804-17383838 Medicago truncatula
Medtr3g450510 1.0kb upstream 1.0kb upstream 1000 false chr3: 17382839-17383838 Medicago truncatula
Medtr3g450510 1.0kb downstream 1.0kb downstream 4035 true chr3: 17378804-17382838 Medicago truncatula
Medtr3g450510 1.0kb downstream 1.0kb downstream 1000 false chr3: 17378804-17379803 Medicago truncatula
Medtr3g450510 2.0kb upstream 2.0kb upstream 5035 true chr3: 17379804-17384838 Medicago truncatula
Medtr3g450510 2.0kb upstream 2.0kb upstream 2000 false chr3: 17382839-17384838 Medicago truncatula
Medtr3g450510 2.0kb downstream 2.0kb downstream 5035 true chr3: 17377804-17382838 Medicago truncatula
Medtr3g450510 2.0kb downstream 2.0kb downstream 2000 false chr3: 17377804-17379803 Medicago truncatula
Medtr3g450510 5.0kb upstream 5.0kb upstream 8035 true chr3: 17379804-17387838 Medicago truncatula
Medtr3g450510 5.0kb upstream 5.0kb upstream 5000 false chr3: 17382839-17387838 Medicago truncatula
Medtr3g450510 5.0kb downstream 5.0kb downstream 8035 true chr3: 17374804-17382838 Medicago truncatula
Medtr3g450510 5.0kb downstream 5.0kb downstream 5000 false chr3: 17374804-17379803 Medicago truncatula
Medtr3g450510 10.0kb upstream 10.0kb upstream 13035 true chr3: 17379804-17392838 Medicago truncatula
Medtr3g450510 10.0kb upstream 10.0kb upstream 10000 false chr3: 17382839-17392838 Medicago truncatula
Medtr3g450510 10.0kb downstream 10.0kb downstream 13035 true chr3: 17369804-17382838 Medicago truncatula
Medtr3g450510 10.0kb downstream 10.0kb downstream 10000 false chr3: 17369804-17379803 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041269 5273 Angiosperm View MSA
122312069 5265 Fabidae View MSA
124069921 5270 Rosid View MSA
123743557 5271 Pentapetalae View MSA
122795955 5272 Eudicot View MSA
121345575 5274 Embryophyte View MSA
123426823 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.005     Low Low
cufflinks 20.091     High High
cufflinks 4.507        
cufflinks 0.007     Low  
cufflinks 19.95     High High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 9.473     High  
cufflinks 0.01     Low  

0 Strain