Gene : Medtr3g449620 M. truncatula Mt4.0v1
Defline:  (1 of 5) 1.5.3.17 - Non-specific polyamine oxidase / Polyamine oxidase Description:  polyamine oxidase-like protein
Genomic Order:  1805 Name:  ? Medtr3g449620
Secondary Identifier:  ? PAC:31059912
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6441 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g449620 0.5kb upstream 0.5kb upstream 7264 true chr3: 16900824-16908087 Medicago truncatula
Medtr3g449620 0.5kb upstream 0.5kb upstream 500 false chr3: 16907588-16908087 Medicago truncatula
Medtr3g449620 0.5kb downstream 0.5kb downstream 7264 true chr3: 16900324-16907587 Medicago truncatula
Medtr3g449620 0.5kb downstream 0.5kb downstream 500 false chr3: 16900324-16900823 Medicago truncatula
Medtr3g449620 1.0kb upstream 1.0kb upstream 7764 true chr3: 16900824-16908587 Medicago truncatula
Medtr3g449620 1.0kb upstream 1.0kb upstream 1000 false chr3: 16907588-16908587 Medicago truncatula
Medtr3g449620 1.0kb downstream 1.0kb downstream 7764 true chr3: 16899824-16907587 Medicago truncatula
Medtr3g449620 1.0kb downstream 1.0kb downstream 1000 false chr3: 16899824-16900823 Medicago truncatula
Medtr3g449620 2.0kb upstream 2.0kb upstream 8764 true chr3: 16900824-16909587 Medicago truncatula
Medtr3g449620 2.0kb upstream 2.0kb upstream 2000 false chr3: 16907588-16909587 Medicago truncatula
Medtr3g449620 2.0kb downstream 2.0kb downstream 8764 true chr3: 16898824-16907587 Medicago truncatula
Medtr3g449620 2.0kb downstream 2.0kb downstream 2000 false chr3: 16898824-16900823 Medicago truncatula
Medtr3g449620 5.0kb upstream 5.0kb upstream 11764 true chr3: 16900824-16912587 Medicago truncatula
Medtr3g449620 5.0kb upstream 5.0kb upstream 5000 false chr3: 16907588-16912587 Medicago truncatula
Medtr3g449620 5.0kb downstream 5.0kb downstream 11764 true chr3: 16895824-16907587 Medicago truncatula
Medtr3g449620 5.0kb downstream 5.0kb downstream 5000 false chr3: 16895824-16900823 Medicago truncatula
Medtr3g449620 10.0kb upstream 10.0kb upstream 16764 true chr3: 16900824-16917587 Medicago truncatula
Medtr3g449620 10.0kb upstream 10.0kb upstream 10000 false chr3: 16907588-16917587 Medicago truncatula
Medtr3g449620 10.0kb downstream 10.0kb downstream 16764 true chr3: 16890824-16907587 Medicago truncatula
Medtr3g449620 10.0kb downstream 10.0kb downstream 10000 false chr3: 16890824-16900823 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310798 5265 Fabidae View MSA
124065173 5270 Rosid View MSA
123745734 5271 Pentapetalae View MSA
122788869 5272 Eudicot View MSA
122044597 5273 Angiosperm View MSA
121345919 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.348        
cufflinks 5.792        
cufflinks 2.595        
cufflinks 2.753        
cufflinks 4.834        
cufflinks 1.382       Low
cufflinks 4.011        
cufflinks 2.898        
cufflinks 17.953     High High

0 Strain