Gene : Medtr3g452380 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR11945:SF150 - AGAMOUS-LIKE MADS-BOX PROTEIN AGL1-RELATED Description:  MADS-box transcription factor
Genomic Order:  1964 Name:  ? Medtr3g452380
Secondary Identifier:  ? PAC:31055468
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g452380 0.5kb upstream 0.5kb upstream 8635 true chr3: 19134712-19143346 Medicago truncatula
Medtr3g452380 0.5kb upstream 0.5kb upstream 500 false chr3: 19142847-19143346 Medicago truncatula
Medtr3g452380 0.5kb downstream 0.5kb downstream 8635 true chr3: 19134212-19142846 Medicago truncatula
Medtr3g452380 0.5kb downstream 0.5kb downstream 500 false chr3: 19134212-19134711 Medicago truncatula
Medtr3g452380 1.0kb upstream 1.0kb upstream 9135 true chr3: 19134712-19143846 Medicago truncatula
Medtr3g452380 1.0kb upstream 1.0kb upstream 1000 false chr3: 19142847-19143846 Medicago truncatula
Medtr3g452380 1.0kb downstream 1.0kb downstream 9135 true chr3: 19133712-19142846 Medicago truncatula
Medtr3g452380 1.0kb downstream 1.0kb downstream 1000 false chr3: 19133712-19134711 Medicago truncatula
Medtr3g452380 2.0kb upstream 2.0kb upstream 10135 true chr3: 19134712-19144846 Medicago truncatula
Medtr3g452380 2.0kb upstream 2.0kb upstream 2000 false chr3: 19142847-19144846 Medicago truncatula
Medtr3g452380 2.0kb downstream 2.0kb downstream 10135 true chr3: 19132712-19142846 Medicago truncatula
Medtr3g452380 2.0kb downstream 2.0kb downstream 2000 false chr3: 19132712-19134711 Medicago truncatula
Medtr3g452380 5.0kb upstream 5.0kb upstream 13135 true chr3: 19134712-19147846 Medicago truncatula
Medtr3g452380 5.0kb upstream 5.0kb upstream 5000 false chr3: 19142847-19147846 Medicago truncatula
Medtr3g452380 5.0kb downstream 5.0kb downstream 13135 true chr3: 19129712-19142846 Medicago truncatula
Medtr3g452380 5.0kb downstream 5.0kb downstream 5000 false chr3: 19129712-19134711 Medicago truncatula
Medtr3g452380 10.0kb upstream 10.0kb upstream 18135 true chr3: 19134712-19152846 Medicago truncatula
Medtr3g452380 10.0kb upstream 10.0kb upstream 10000 false chr3: 19142847-19152846 Medicago truncatula
Medtr3g452380 10.0kb downstream 10.0kb downstream 18135 true chr3: 19124712-19142846 Medicago truncatula
Medtr3g452380 10.0kb downstream 10.0kb downstream 10000 false chr3: 19124712-19134711 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307292 5265 Fabidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low High
cufflinks 0.003     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain