Gene : Medtr3g461520 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR32170:SF0 - PROTEIN T28B8.3, ISOFORM A-RELATED Description:  proteasome activator complex subunit-like protein
Genomic Order:  2549 Name:  ? Medtr3g461520
Secondary Identifier:  ? PAC:31058644
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g461520 0.5kb upstream 0.5kb upstream 16110 true chr3: 24463573-24479682 Medicago truncatula
Medtr3g461520 0.5kb upstream 0.5kb upstream 500 false chr3: 24479183-24479682 Medicago truncatula
Medtr3g461520 0.5kb downstream 0.5kb downstream 16110 true chr3: 24463073-24479182 Medicago truncatula
Medtr3g461520 0.5kb downstream 0.5kb downstream 500 false chr3: 24463073-24463572 Medicago truncatula
Medtr3g461520 1.0kb upstream 1.0kb upstream 16610 true chr3: 24463573-24480182 Medicago truncatula
Medtr3g461520 1.0kb upstream 1.0kb upstream 1000 false chr3: 24479183-24480182 Medicago truncatula
Medtr3g461520 1.0kb downstream 1.0kb downstream 16610 true chr3: 24462573-24479182 Medicago truncatula
Medtr3g461520 1.0kb downstream 1.0kb downstream 1000 false chr3: 24462573-24463572 Medicago truncatula
Medtr3g461520 2.0kb upstream 2.0kb upstream 17610 true chr3: 24463573-24481182 Medicago truncatula
Medtr3g461520 2.0kb upstream 2.0kb upstream 2000 false chr3: 24479183-24481182 Medicago truncatula
Medtr3g461520 2.0kb downstream 2.0kb downstream 17610 true chr3: 24461573-24479182 Medicago truncatula
Medtr3g461520 2.0kb downstream 2.0kb downstream 2000 false chr3: 24461573-24463572 Medicago truncatula
Medtr3g461520 5.0kb upstream 5.0kb upstream 20610 true chr3: 24463573-24484182 Medicago truncatula
Medtr3g461520 5.0kb upstream 5.0kb upstream 5000 false chr3: 24479183-24484182 Medicago truncatula
Medtr3g461520 5.0kb downstream 5.0kb downstream 20610 true chr3: 24458573-24479182 Medicago truncatula
Medtr3g461520 5.0kb downstream 5.0kb downstream 5000 false chr3: 24458573-24463572 Medicago truncatula
Medtr3g461520 10.0kb upstream 10.0kb upstream 25610 true chr3: 24463573-24489182 Medicago truncatula
Medtr3g461520 10.0kb upstream 10.0kb upstream 10000 false chr3: 24479183-24489182 Medicago truncatula
Medtr3g461520 10.0kb downstream 10.0kb downstream 25610 true chr3: 24453573-24479182 Medicago truncatula
Medtr3g461520 10.0kb downstream 10.0kb downstream 10000 false chr3: 24453573-24463572 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302154 5265 Fabidae View MSA
124067212 5270 Rosid View MSA
123738466 5271 Pentapetalae View MSA
122787413 5272 Eudicot View MSA
122041914 5273 Angiosperm View MSA
121345239 5274 Embryophyte View MSA
123424572 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.663       High
cufflinks 2.546        
cufflinks 1.598        
cufflinks 1.34       Low
cufflinks 2.612        
cufflinks 1.099       Low
cufflinks 3.971       High
cufflinks 1.848        
cufflinks 2.159        

0 Strain