Gene : Medtr3g461000 M. truncatula Mt4.0v1
Defline:  (1 of 6) PTHR11638:SF119 - CHAPERONE PROTEIN CLPC1, CHLOROPLASTIC Description:  ATP-dependent Clp protease ATP-binding subunit, putative
Genomic Order:  2487 Name:  ? Medtr3g461000
Secondary Identifier:  ? PAC:31056523
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g461000 0.5kb upstream 0.5kb upstream 3869 true chr3: 24064555-24068423 Medicago truncatula
Medtr3g461000 0.5kb upstream 0.5kb upstream 500 false chr3: 24064555-24065054 Medicago truncatula
Medtr3g461000 0.5kb downstream 0.5kb downstream 3869 true chr3: 24065055-24068923 Medicago truncatula
Medtr3g461000 0.5kb downstream 0.5kb downstream 500 false chr3: 24068424-24068923 Medicago truncatula
Medtr3g461000 1.0kb upstream 1.0kb upstream 4369 true chr3: 24064055-24068423 Medicago truncatula
Medtr3g461000 1.0kb upstream 1.0kb upstream 1000 false chr3: 24064055-24065054 Medicago truncatula
Medtr3g461000 1.0kb downstream 1.0kb downstream 4369 true chr3: 24065055-24069423 Medicago truncatula
Medtr3g461000 1.0kb downstream 1.0kb downstream 1000 false chr3: 24068424-24069423 Medicago truncatula
Medtr3g461000 2.0kb upstream 2.0kb upstream 5369 true chr3: 24063055-24068423 Medicago truncatula
Medtr3g461000 2.0kb upstream 2.0kb upstream 2000 false chr3: 24063055-24065054 Medicago truncatula
Medtr3g461000 2.0kb downstream 2.0kb downstream 5369 true chr3: 24065055-24070423 Medicago truncatula
Medtr3g461000 2.0kb downstream 2.0kb downstream 2000 false chr3: 24068424-24070423 Medicago truncatula
Medtr3g461000 5.0kb upstream 5.0kb upstream 8369 true chr3: 24060055-24068423 Medicago truncatula
Medtr3g461000 5.0kb upstream 5.0kb upstream 5000 false chr3: 24060055-24065054 Medicago truncatula
Medtr3g461000 5.0kb downstream 5.0kb downstream 8369 true chr3: 24065055-24073423 Medicago truncatula
Medtr3g461000 5.0kb downstream 5.0kb downstream 5000 false chr3: 24068424-24073423 Medicago truncatula
Medtr3g461000 10.0kb upstream 10.0kb upstream 13369 true chr3: 24055055-24068423 Medicago truncatula
Medtr3g461000 10.0kb upstream 10.0kb upstream 10000 false chr3: 24055055-24065054 Medicago truncatula
Medtr3g461000 10.0kb downstream 10.0kb downstream 13369 true chr3: 24065055-24078423 Medicago truncatula
Medtr3g461000 10.0kb downstream 10.0kb downstream 10000 false chr3: 24068424-24078423 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295461 5265 Fabidae View MSA
124072221 5270 Rosid View MSA
123747795 5271 Pentapetalae View MSA
122795236 5272 Eudicot View MSA
122050456 5273 Angiosperm View MSA
121347252 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain