Gene : Medtr3g460700 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22807:SF30 - RIBOSOMAL RNA METHYLTRANSFERASE NOP2-RELATED Description:  NOL1/NOP2/sun family RNA methylase, putative
Genomic Order:  2474 Name:  ? Medtr3g460700
Secondary Identifier:  ? PAC:31056430
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g460700 0.5kb upstream 0.5kb upstream 7952 true chr3: 23809675-23817626 Medicago truncatula
Medtr3g460700 0.5kb upstream 0.5kb upstream 500 false chr3: 23817127-23817626 Medicago truncatula
Medtr3g460700 0.5kb downstream 0.5kb downstream 7952 true chr3: 23809175-23817126 Medicago truncatula
Medtr3g460700 0.5kb downstream 0.5kb downstream 500 false chr3: 23809175-23809674 Medicago truncatula
Medtr3g460700 1.0kb upstream 1.0kb upstream 8452 true chr3: 23809675-23818126 Medicago truncatula
Medtr3g460700 1.0kb upstream 1.0kb upstream 1000 false chr3: 23817127-23818126 Medicago truncatula
Medtr3g460700 1.0kb downstream 1.0kb downstream 8452 true chr3: 23808675-23817126 Medicago truncatula
Medtr3g460700 1.0kb downstream 1.0kb downstream 1000 false chr3: 23808675-23809674 Medicago truncatula
Medtr3g460700 2.0kb upstream 2.0kb upstream 9452 true chr3: 23809675-23819126 Medicago truncatula
Medtr3g460700 2.0kb upstream 2.0kb upstream 2000 false chr3: 23817127-23819126 Medicago truncatula
Medtr3g460700 2.0kb downstream 2.0kb downstream 9452 true chr3: 23807675-23817126 Medicago truncatula
Medtr3g460700 2.0kb downstream 2.0kb downstream 2000 false chr3: 23807675-23809674 Medicago truncatula
Medtr3g460700 5.0kb upstream 5.0kb upstream 12452 true chr3: 23809675-23822126 Medicago truncatula
Medtr3g460700 5.0kb upstream 5.0kb upstream 5000 false chr3: 23817127-23822126 Medicago truncatula
Medtr3g460700 5.0kb downstream 5.0kb downstream 12452 true chr3: 23804675-23817126 Medicago truncatula
Medtr3g460700 5.0kb downstream 5.0kb downstream 5000 false chr3: 23804675-23809674 Medicago truncatula
Medtr3g460700 10.0kb upstream 10.0kb upstream 17452 true chr3: 23809675-23827126 Medicago truncatula
Medtr3g460700 10.0kb upstream 10.0kb upstream 10000 false chr3: 23817127-23827126 Medicago truncatula
Medtr3g460700 10.0kb downstream 10.0kb downstream 17452 true chr3: 23799675-23817126 Medicago truncatula
Medtr3g460700 10.0kb downstream 10.0kb downstream 10000 false chr3: 23799675-23809674 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303204 5265 Fabidae View MSA
124073549 5270 Rosid View MSA
123740047 5271 Pentapetalae View MSA
122787436 5272 Eudicot View MSA
122043907 5273 Angiosperm View MSA
121346553 5274 Embryophyte View MSA
123427921 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.164        
cufflinks 5.483        
cufflinks 5.5        
cufflinks 1.492       Low
cufflinks 11.594     High High
cufflinks 1.218       Low
cufflinks 4.126        
cufflinks 6.596        
cufflinks 4.089        

0 Strain