Gene : Medtr3g462930 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR23076:SF70 - ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 7, CHLOROPLASTIC-RELATED Description:  ATP-dependent zinc metalloprotease FTSH protein
Genomic Order:  2646 Name:  ? Medtr3g462930
Secondary Identifier:  ? PAC:31054429
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g462930 0.5kb upstream 0.5kb upstream 9227 true chr3: 25177738-25186964 Medicago truncatula
Medtr3g462930 0.5kb upstream 0.5kb upstream 500 false chr3: 25177738-25178237 Medicago truncatula
Medtr3g462930 0.5kb downstream 0.5kb downstream 9227 true chr3: 25178238-25187464 Medicago truncatula
Medtr3g462930 0.5kb downstream 0.5kb downstream 500 false chr3: 25186965-25187464 Medicago truncatula
Medtr3g462930 1.0kb upstream 1.0kb upstream 9727 true chr3: 25177238-25186964 Medicago truncatula
Medtr3g462930 1.0kb upstream 1.0kb upstream 1000 false chr3: 25177238-25178237 Medicago truncatula
Medtr3g462930 1.0kb downstream 1.0kb downstream 9727 true chr3: 25178238-25187964 Medicago truncatula
Medtr3g462930 1.0kb downstream 1.0kb downstream 1000 false chr3: 25186965-25187964 Medicago truncatula
Medtr3g462930 2.0kb upstream 2.0kb upstream 10727 true chr3: 25176238-25186964 Medicago truncatula
Medtr3g462930 2.0kb upstream 2.0kb upstream 2000 false chr3: 25176238-25178237 Medicago truncatula
Medtr3g462930 2.0kb downstream 2.0kb downstream 10727 true chr3: 25178238-25188964 Medicago truncatula
Medtr3g462930 2.0kb downstream 2.0kb downstream 2000 false chr3: 25186965-25188964 Medicago truncatula
Medtr3g462930 5.0kb upstream 5.0kb upstream 13727 true chr3: 25173238-25186964 Medicago truncatula
Medtr3g462930 5.0kb upstream 5.0kb upstream 5000 false chr3: 25173238-25178237 Medicago truncatula
Medtr3g462930 5.0kb downstream 5.0kb downstream 13727 true chr3: 25178238-25191964 Medicago truncatula
Medtr3g462930 5.0kb downstream 5.0kb downstream 5000 false chr3: 25186965-25191964 Medicago truncatula
Medtr3g462930 10.0kb upstream 10.0kb upstream 18727 true chr3: 25168238-25186964 Medicago truncatula
Medtr3g462930 10.0kb upstream 10.0kb upstream 10000 false chr3: 25168238-25178237 Medicago truncatula
Medtr3g462930 10.0kb downstream 10.0kb downstream 18727 true chr3: 25178238-25196964 Medicago truncatula
Medtr3g462930 10.0kb downstream 10.0kb downstream 10000 false chr3: 25186965-25196964 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122787549 5272 Eudicot View MSA
122297668 5265 Fabidae View MSA
124036109 5270 Rosid View MSA
123748057 5271 Pentapetalae View MSA
122042272 5273 Angiosperm View MSA
121349711 5274 Embryophyte View MSA
123424503 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.707        
cufflinks 6.603        
cufflinks 7.411        
cufflinks 3.352        
cufflinks 8.535       High
cufflinks 1.722       Low
cufflinks 4.188        
cufflinks 6.08        
cufflinks 3.812        

0 Strain