Gene : Medtr3g113290 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR31580:SF4 - FILAMENT-LIKE PLANT PROTEIN 4-RELATED Description:  filament-plant-like protein
Genomic Order:  6413 Name:  ? Medtr3g113290
Secondary Identifier:  ? PAC:31056902
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g113290 0.5kb upstream 0.5kb upstream 5987 true chr3: 52974733-52980719 Medicago truncatula
Medtr3g113290 0.5kb upstream 0.5kb upstream 500 false chr3: 52974733-52975232 Medicago truncatula
Medtr3g113290 0.5kb downstream 0.5kb downstream 5987 true chr3: 52975233-52981219 Medicago truncatula
Medtr3g113290 0.5kb downstream 0.5kb downstream 500 false chr3: 52980720-52981219 Medicago truncatula
Medtr3g113290 1.0kb upstream 1.0kb upstream 6487 true chr3: 52974233-52980719 Medicago truncatula
Medtr3g113290 1.0kb upstream 1.0kb upstream 1000 false chr3: 52974233-52975232 Medicago truncatula
Medtr3g113290 1.0kb downstream 1.0kb downstream 6487 true chr3: 52975233-52981719 Medicago truncatula
Medtr3g113290 1.0kb downstream 1.0kb downstream 1000 false chr3: 52980720-52981719 Medicago truncatula
Medtr3g113290 2.0kb upstream 2.0kb upstream 7487 true chr3: 52973233-52980719 Medicago truncatula
Medtr3g113290 2.0kb upstream 2.0kb upstream 2000 false chr3: 52973233-52975232 Medicago truncatula
Medtr3g113290 2.0kb downstream 2.0kb downstream 7487 true chr3: 52975233-52982719 Medicago truncatula
Medtr3g113290 2.0kb downstream 2.0kb downstream 2000 false chr3: 52980720-52982719 Medicago truncatula
Medtr3g113290 5.0kb upstream 5.0kb upstream 10487 true chr3: 52970233-52980719 Medicago truncatula
Medtr3g113290 5.0kb upstream 5.0kb upstream 5000 false chr3: 52970233-52975232 Medicago truncatula
Medtr3g113290 5.0kb downstream 5.0kb downstream 10487 true chr3: 52975233-52985719 Medicago truncatula
Medtr3g113290 5.0kb downstream 5.0kb downstream 5000 false chr3: 52980720-52985719 Medicago truncatula
Medtr3g113290 10.0kb upstream 10.0kb upstream 15487 true chr3: 52965233-52980719 Medicago truncatula
Medtr3g113290 10.0kb upstream 10.0kb upstream 10000 false chr3: 52965233-52975232 Medicago truncatula
Medtr3g113290 10.0kb downstream 10.0kb downstream 15487 true chr3: 52975233-52990719 Medicago truncatula
Medtr3g113290 10.0kb downstream 10.0kb downstream 10000 false chr3: 52980720-52990719 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311025 5265 Fabidae View MSA
124071208 5270 Rosid View MSA
123744049 5271 Pentapetalae View MSA
122790238 5272 Eudicot View MSA
122044251 5273 Angiosperm View MSA
121351576 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.337        
cufflinks 2.732        
cufflinks 1.573        
cufflinks 0.336       Low
cufflinks 2.502        
cufflinks 0.314       Low
cufflinks 0.919        
cufflinks 1.494        
cufflinks 1.841        

0 Strain