Gene : Medtr3g113800 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR12081:SF51 - TRANSCRIPTION FACTOR E2FC Description:  E2F transcription factor
Genomic Order:  6425 Name:  ? Medtr3g113800
Secondary Identifier:  ? PAC:31055094
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g113800 0.5kb upstream 0.5kb upstream 4865 true chr3: 53083226-53088090 Medicago truncatula
Medtr3g113800 0.5kb upstream 0.5kb upstream 500 false chr3: 53087591-53088090 Medicago truncatula
Medtr3g113800 0.5kb downstream 0.5kb downstream 4865 true chr3: 53082726-53087590 Medicago truncatula
Medtr3g113800 0.5kb downstream 0.5kb downstream 500 false chr3: 53082726-53083225 Medicago truncatula
Medtr3g113800 1.0kb upstream 1.0kb upstream 5365 true chr3: 53083226-53088590 Medicago truncatula
Medtr3g113800 1.0kb upstream 1.0kb upstream 1000 false chr3: 53087591-53088590 Medicago truncatula
Medtr3g113800 1.0kb downstream 1.0kb downstream 5365 true chr3: 53082226-53087590 Medicago truncatula
Medtr3g113800 1.0kb downstream 1.0kb downstream 1000 false chr3: 53082226-53083225 Medicago truncatula
Medtr3g113800 2.0kb upstream 2.0kb upstream 6365 true chr3: 53083226-53089590 Medicago truncatula
Medtr3g113800 2.0kb upstream 2.0kb upstream 2000 false chr3: 53087591-53089590 Medicago truncatula
Medtr3g113800 2.0kb downstream 2.0kb downstream 6365 true chr3: 53081226-53087590 Medicago truncatula
Medtr3g113800 2.0kb downstream 2.0kb downstream 2000 false chr3: 53081226-53083225 Medicago truncatula
Medtr3g113800 5.0kb upstream 5.0kb upstream 9365 true chr3: 53083226-53092590 Medicago truncatula
Medtr3g113800 5.0kb upstream 5.0kb upstream 5000 false chr3: 53087591-53092590 Medicago truncatula
Medtr3g113800 5.0kb downstream 5.0kb downstream 9365 true chr3: 53078226-53087590 Medicago truncatula
Medtr3g113800 5.0kb downstream 5.0kb downstream 5000 false chr3: 53078226-53083225 Medicago truncatula
Medtr3g113800 10.0kb upstream 10.0kb upstream 14365 true chr3: 53083226-53097590 Medicago truncatula
Medtr3g113800 10.0kb upstream 10.0kb upstream 10000 false chr3: 53087591-53097590 Medicago truncatula
Medtr3g113800 10.0kb downstream 10.0kb downstream 14365 true chr3: 53073226-53087590 Medicago truncatula
Medtr3g113800 10.0kb downstream 10.0kb downstream 10000 false chr3: 53073226-53083225 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792207 5273 Angiosperm View MSA
122305494 5265 Fabidae View MSA
124061286 5270 Rosid View MSA
123738589 5271 Pentapetalae View MSA
122796961 5272 Eudicot View MSA
121063453 5274 Embryophyte View MSA
123428750 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.401       High
cufflinks 0.145        
cufflinks 0.132        
cufflinks 0.119        
cufflinks 0.155        
cufflinks 0.045     Low Low
cufflinks 0.215        
cufflinks 0.088        
cufflinks 0.198        

0 Strain