Gene : Medtr3g114870 M. truncatula Mt4.0v1
Defline:  (1 of 2) 4.1.1.17 - Ornithine decarboxylase / L-ornithine carboxy-lyase Description:  lysine/ornithine decarboxylase
Genomic Order:  6503 Name:  ? Medtr3g114870
Secondary Identifier:  ? PAC:31055587
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula POLYAMINSYN3-PWY Medicago truncatula pathologic  
Mtruncatula PWY-46 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g114870 0.5kb upstream 0.5kb upstream 2245 true chr3: 53635908-53638152 Medicago truncatula
Medtr3g114870 0.5kb upstream 0.5kb upstream 500 false chr3: 53637653-53638152 Medicago truncatula
Medtr3g114870 0.5kb downstream 0.5kb downstream 2245 true chr3: 53635408-53637652 Medicago truncatula
Medtr3g114870 0.5kb downstream 0.5kb downstream 500 false chr3: 53635408-53635907 Medicago truncatula
Medtr3g114870 1.0kb upstream 1.0kb upstream 2745 true chr3: 53635908-53638652 Medicago truncatula
Medtr3g114870 1.0kb upstream 1.0kb upstream 1000 false chr3: 53637653-53638652 Medicago truncatula
Medtr3g114870 1.0kb downstream 1.0kb downstream 2745 true chr3: 53634908-53637652 Medicago truncatula
Medtr3g114870 1.0kb downstream 1.0kb downstream 1000 false chr3: 53634908-53635907 Medicago truncatula
Medtr3g114870 2.0kb upstream 2.0kb upstream 3745 true chr3: 53635908-53639652 Medicago truncatula
Medtr3g114870 2.0kb upstream 2.0kb upstream 2000 false chr3: 53637653-53639652 Medicago truncatula
Medtr3g114870 2.0kb downstream 2.0kb downstream 3745 true chr3: 53633908-53637652 Medicago truncatula
Medtr3g114870 2.0kb downstream 2.0kb downstream 2000 false chr3: 53633908-53635907 Medicago truncatula
Medtr3g114870 5.0kb upstream 5.0kb upstream 6745 true chr3: 53635908-53642652 Medicago truncatula
Medtr3g114870 5.0kb upstream 5.0kb upstream 5000 false chr3: 53637653-53642652 Medicago truncatula
Medtr3g114870 5.0kb downstream 5.0kb downstream 6745 true chr3: 53630908-53637652 Medicago truncatula
Medtr3g114870 5.0kb downstream 5.0kb downstream 5000 false chr3: 53630908-53635907 Medicago truncatula
Medtr3g114870 10.0kb upstream 10.0kb upstream 11745 true chr3: 53635908-53647652 Medicago truncatula
Medtr3g114870 10.0kb upstream 10.0kb upstream 10000 false chr3: 53637653-53647652 Medicago truncatula
Medtr3g114870 10.0kb downstream 10.0kb downstream 11745 true chr3: 53625908-53637652 Medicago truncatula
Medtr3g114870 10.0kb downstream 10.0kb downstream 10000 false chr3: 53625908-53635907 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301318 5265 Fabidae View MSA
124070276 5270 Rosid View MSA
123742733 5271 Pentapetalae View MSA
122796086 5272 Eudicot View MSA
122048449 5273 Angiosperm View MSA
121349416 5274 Embryophyte View MSA
123428095 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.243        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.175        
cufflinks 0.332        
cufflinks 0.009     Low Low
cufflinks 1.436       High

0 Strain