Gene : Medtr3g114780 M. truncatula Mt4.0v1
Defline:  (1 of 1) 2.1.1.142 - Cycloartenol 24-C-methyltransferase / Sterol C-methyltransferase Description:  24-methylenesterol C-methyltransferase
Genomic Order:  6498 Name:  ? Medtr3g114780
Secondary Identifier:  ? PAC:31058112
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-2541 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g114780 0.5kb upstream 0.5kb upstream 2282 true chr3: 53586058-53588339 Medicago truncatula
Medtr3g114780 0.5kb upstream 0.5kb upstream 500 false chr3: 53587840-53588339 Medicago truncatula
Medtr3g114780 0.5kb downstream 0.5kb downstream 2282 true chr3: 53585558-53587839 Medicago truncatula
Medtr3g114780 0.5kb downstream 0.5kb downstream 500 false chr3: 53585558-53586057 Medicago truncatula
Medtr3g114780 1.0kb upstream 1.0kb upstream 2782 true chr3: 53586058-53588839 Medicago truncatula
Medtr3g114780 1.0kb upstream 1.0kb upstream 1000 false chr3: 53587840-53588839 Medicago truncatula
Medtr3g114780 1.0kb downstream 1.0kb downstream 2782 true chr3: 53585058-53587839 Medicago truncatula
Medtr3g114780 1.0kb downstream 1.0kb downstream 1000 false chr3: 53585058-53586057 Medicago truncatula
Medtr3g114780 2.0kb upstream 2.0kb upstream 3782 true chr3: 53586058-53589839 Medicago truncatula
Medtr3g114780 2.0kb upstream 2.0kb upstream 2000 false chr3: 53587840-53589839 Medicago truncatula
Medtr3g114780 2.0kb downstream 2.0kb downstream 3782 true chr3: 53584058-53587839 Medicago truncatula
Medtr3g114780 2.0kb downstream 2.0kb downstream 2000 false chr3: 53584058-53586057 Medicago truncatula
Medtr3g114780 5.0kb upstream 5.0kb upstream 6782 true chr3: 53586058-53592839 Medicago truncatula
Medtr3g114780 5.0kb upstream 5.0kb upstream 5000 false chr3: 53587840-53592839 Medicago truncatula
Medtr3g114780 5.0kb downstream 5.0kb downstream 6782 true chr3: 53581058-53587839 Medicago truncatula
Medtr3g114780 5.0kb downstream 5.0kb downstream 5000 false chr3: 53581058-53586057 Medicago truncatula
Medtr3g114780 10.0kb upstream 10.0kb upstream 11782 true chr3: 53586058-53597839 Medicago truncatula
Medtr3g114780 10.0kb upstream 10.0kb upstream 10000 false chr3: 53587840-53597839 Medicago truncatula
Medtr3g114780 10.0kb downstream 10.0kb downstream 11782 true chr3: 53576058-53587839 Medicago truncatula
Medtr3g114780 10.0kb downstream 10.0kb downstream 10000 false chr3: 53576058-53586057 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308371 5265 Fabidae View MSA
124062821 5270 Rosid View MSA
123749878 5271 Pentapetalae View MSA
122793633 5272 Eudicot View MSA
122047271 5273 Angiosperm View MSA
121344259 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.805     High High
cufflinks 29.837     High  
cufflinks 16.391     High  
cufflinks 16.751     High  
cufflinks 27.423     High  
cufflinks 9.571       Low
cufflinks 10.703     High Low
cufflinks 14.758     High  
cufflinks 51.006     High High

0 Strain