Gene : Medtr3g115290 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11705 - PROTEASE FAMILY M14 CARBOXYPEPTIDASE A,B Description:  zinc carboxypeptidase family protein
Genomic Order:  6533 Name:  ? Medtr3g115290
Secondary Identifier:  ? PAC:31057486
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g115290 0.5kb upstream 0.5kb upstream 5288 true chr3: 53907394-53912681 Medicago truncatula
Medtr3g115290 0.5kb upstream 0.5kb upstream 500 false chr3: 53912182-53912681 Medicago truncatula
Medtr3g115290 0.5kb downstream 0.5kb downstream 5288 true chr3: 53906894-53912181 Medicago truncatula
Medtr3g115290 0.5kb downstream 0.5kb downstream 500 false chr3: 53906894-53907393 Medicago truncatula
Medtr3g115290 1.0kb upstream 1.0kb upstream 5788 true chr3: 53907394-53913181 Medicago truncatula
Medtr3g115290 1.0kb upstream 1.0kb upstream 1000 false chr3: 53912182-53913181 Medicago truncatula
Medtr3g115290 1.0kb downstream 1.0kb downstream 5788 true chr3: 53906394-53912181 Medicago truncatula
Medtr3g115290 1.0kb downstream 1.0kb downstream 1000 false chr3: 53906394-53907393 Medicago truncatula
Medtr3g115290 2.0kb upstream 2.0kb upstream 6788 true chr3: 53907394-53914181 Medicago truncatula
Medtr3g115290 2.0kb upstream 2.0kb upstream 2000 false chr3: 53912182-53914181 Medicago truncatula
Medtr3g115290 2.0kb downstream 2.0kb downstream 6788 true chr3: 53905394-53912181 Medicago truncatula
Medtr3g115290 2.0kb downstream 2.0kb downstream 2000 false chr3: 53905394-53907393 Medicago truncatula
Medtr3g115290 5.0kb upstream 5.0kb upstream 9788 true chr3: 53907394-53917181 Medicago truncatula
Medtr3g115290 5.0kb upstream 5.0kb upstream 5000 false chr3: 53912182-53917181 Medicago truncatula
Medtr3g115290 5.0kb downstream 5.0kb downstream 9788 true chr3: 53902394-53912181 Medicago truncatula
Medtr3g115290 5.0kb downstream 5.0kb downstream 5000 false chr3: 53902394-53907393 Medicago truncatula
Medtr3g115290 10.0kb upstream 10.0kb upstream 14788 true chr3: 53907394-53922181 Medicago truncatula
Medtr3g115290 10.0kb upstream 10.0kb upstream 10000 false chr3: 53912182-53922181 Medicago truncatula
Medtr3g115290 10.0kb downstream 10.0kb downstream 14788 true chr3: 53897394-53912181 Medicago truncatula
Medtr3g115290 10.0kb downstream 10.0kb downstream 10000 false chr3: 53897394-53907393 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301012 5265 Fabidae View MSA
124061314 5270 Rosid View MSA
123745748 5271 Pentapetalae View MSA
122785850 5272 Eudicot View MSA
122042944 5273 Angiosperm View MSA
121350771 5274 Embryophyte View MSA
123426036 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.86        
cufflinks 0.964        
cufflinks 1.157        
cufflinks 0.494       Low
cufflinks 0.981        
cufflinks 0.309       Low
cufflinks 0.956        
cufflinks 1.019        
cufflinks 0.851        

0 Strain