Gene : Medtr3g115370 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11465//PTHR11465:SF19 - CATALASE Description:  catalase heme-binding enzyme
Genomic Order:  6538 Name:  ? Medtr3g115370
Secondary Identifier:  ? PAC:31053684
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula DETOX1-PWY Medicago truncatula pathologic  
Mtruncatula DETOX1-PWY-1 Medicago truncatula pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g115370 0.5kb upstream 0.5kb upstream 5073 true chr3: 53950598-53955670 Medicago truncatula
Medtr3g115370 0.5kb upstream 0.5kb upstream 500 false chr3: 53950598-53951097 Medicago truncatula
Medtr3g115370 0.5kb downstream 0.5kb downstream 5073 true chr3: 53951098-53956170 Medicago truncatula
Medtr3g115370 0.5kb downstream 0.5kb downstream 500 false chr3: 53955671-53956170 Medicago truncatula
Medtr3g115370 1.0kb upstream 1.0kb upstream 5573 true chr3: 53950098-53955670 Medicago truncatula
Medtr3g115370 1.0kb upstream 1.0kb upstream 1000 false chr3: 53950098-53951097 Medicago truncatula
Medtr3g115370 1.0kb downstream 1.0kb downstream 5573 true chr3: 53951098-53956670 Medicago truncatula
Medtr3g115370 1.0kb downstream 1.0kb downstream 1000 false chr3: 53955671-53956670 Medicago truncatula
Medtr3g115370 2.0kb upstream 2.0kb upstream 6573 true chr3: 53949098-53955670 Medicago truncatula
Medtr3g115370 2.0kb upstream 2.0kb upstream 2000 false chr3: 53949098-53951097 Medicago truncatula
Medtr3g115370 2.0kb downstream 2.0kb downstream 6573 true chr3: 53951098-53957670 Medicago truncatula
Medtr3g115370 2.0kb downstream 2.0kb downstream 2000 false chr3: 53955671-53957670 Medicago truncatula
Medtr3g115370 5.0kb upstream 5.0kb upstream 9573 true chr3: 53946098-53955670 Medicago truncatula
Medtr3g115370 5.0kb upstream 5.0kb upstream 5000 false chr3: 53946098-53951097 Medicago truncatula
Medtr3g115370 5.0kb downstream 5.0kb downstream 9573 true chr3: 53951098-53960670 Medicago truncatula
Medtr3g115370 5.0kb downstream 5.0kb downstream 5000 false chr3: 53955671-53960670 Medicago truncatula
Medtr3g115370 10.0kb upstream 10.0kb upstream 14573 true chr3: 53941098-53955670 Medicago truncatula
Medtr3g115370 10.0kb upstream 10.0kb upstream 10000 false chr3: 53941098-53951097 Medicago truncatula
Medtr3g115370 10.0kb downstream 10.0kb downstream 14573 true chr3: 53951098-53965670 Medicago truncatula
Medtr3g115370 10.0kb downstream 10.0kb downstream 10000 false chr3: 53955671-53965670 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040958 5273 Angiosperm View MSA
122309961 5265 Fabidae View MSA
124061092 5270 Rosid View MSA
123744547 5271 Pentapetalae View MSA
122789351 5272 Eudicot View MSA
121344781 5274 Embryophyte View MSA
123424047 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.163     High Low
cufflinks 175.467     High High
cufflinks 201.649     High High
cufflinks 78.311     High  
cufflinks 110.098     High  
cufflinks 34.798     High Low
cufflinks 35.457     High  
cufflinks 168.814     High High
cufflinks 52.893     High  

0 Strain