Gene : Medtr3g115120 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR21450:SF19 - F5M15.15 Description:  DUF630 family protein
Genomic Order:  6522 Name:  ? Medtr3g115120
Secondary Identifier:  ? PAC:31058935
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g115120 0.5kb upstream 0.5kb upstream 4022 true chr3: 53802656-53806677 Medicago truncatula
Medtr3g115120 0.5kb upstream 0.5kb upstream 500 false chr3: 53806178-53806677 Medicago truncatula
Medtr3g115120 0.5kb downstream 0.5kb downstream 4022 true chr3: 53802156-53806177 Medicago truncatula
Medtr3g115120 0.5kb downstream 0.5kb downstream 500 false chr3: 53802156-53802655 Medicago truncatula
Medtr3g115120 1.0kb upstream 1.0kb upstream 4522 true chr3: 53802656-53807177 Medicago truncatula
Medtr3g115120 1.0kb upstream 1.0kb upstream 1000 false chr3: 53806178-53807177 Medicago truncatula
Medtr3g115120 1.0kb downstream 1.0kb downstream 4522 true chr3: 53801656-53806177 Medicago truncatula
Medtr3g115120 1.0kb downstream 1.0kb downstream 1000 false chr3: 53801656-53802655 Medicago truncatula
Medtr3g115120 2.0kb upstream 2.0kb upstream 5522 true chr3: 53802656-53808177 Medicago truncatula
Medtr3g115120 2.0kb upstream 2.0kb upstream 2000 false chr3: 53806178-53808177 Medicago truncatula
Medtr3g115120 2.0kb downstream 2.0kb downstream 5522 true chr3: 53800656-53806177 Medicago truncatula
Medtr3g115120 2.0kb downstream 2.0kb downstream 2000 false chr3: 53800656-53802655 Medicago truncatula
Medtr3g115120 5.0kb upstream 5.0kb upstream 8522 true chr3: 53802656-53811177 Medicago truncatula
Medtr3g115120 5.0kb upstream 5.0kb upstream 5000 false chr3: 53806178-53811177 Medicago truncatula
Medtr3g115120 5.0kb downstream 5.0kb downstream 8522 true chr3: 53797656-53806177 Medicago truncatula
Medtr3g115120 5.0kb downstream 5.0kb downstream 5000 false chr3: 53797656-53802655 Medicago truncatula
Medtr3g115120 10.0kb upstream 10.0kb upstream 13522 true chr3: 53802656-53816177 Medicago truncatula
Medtr3g115120 10.0kb upstream 10.0kb upstream 10000 false chr3: 53806178-53816177 Medicago truncatula
Medtr3g115120 10.0kb downstream 10.0kb downstream 13522 true chr3: 53792656-53806177 Medicago truncatula
Medtr3g115120 10.0kb downstream 10.0kb downstream 10000 false chr3: 53792656-53802655 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310140 5265 Fabidae View MSA
124072264 5270 Rosid View MSA
123745447 5271 Pentapetalae View MSA
122790852 5272 Eudicot View MSA
122049285 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.444        
cufflinks 2.375        
cufflinks 2.703        
cufflinks 0.007     Low Low
cufflinks 4.419        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.081        
cufflinks 2.616        
cufflinks 0.071     Low  

0 Strain