Gene : Medtr3g115920 M. truncatula Mt4.0v1
Defline:  (1 of 3) 1.2.1.13 - Glyceraldehyde-3-phosphate dehydrogenase (NADP(+)) (phosphorylating) / Triosephosphate dehydrogenase (NADP+) Description:  glyceraldehyde-3-phosphate dehydrogenase B
Genomic Order:  6564 Name:  ? Medtr3g115920
Secondary Identifier:  ? PAC:31061159
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula CALVIN-PWY Medicago truncatula pathologic  
Mtruncatula PHOTOALL-PWY Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g115920 0.5kb upstream 0.5kb upstream 4463 true chr3: 54180220-54184682 Medicago truncatula
Medtr3g115920 0.5kb upstream 0.5kb upstream 500 false chr3: 54184183-54184682 Medicago truncatula
Medtr3g115920 0.5kb downstream 0.5kb downstream 4463 true chr3: 54179720-54184182 Medicago truncatula
Medtr3g115920 0.5kb downstream 0.5kb downstream 500 false chr3: 54179720-54180219 Medicago truncatula
Medtr3g115920 1.0kb upstream 1.0kb upstream 4963 true chr3: 54180220-54185182 Medicago truncatula
Medtr3g115920 1.0kb upstream 1.0kb upstream 1000 false chr3: 54184183-54185182 Medicago truncatula
Medtr3g115920 1.0kb downstream 1.0kb downstream 4963 true chr3: 54179220-54184182 Medicago truncatula
Medtr3g115920 1.0kb downstream 1.0kb downstream 1000 false chr3: 54179220-54180219 Medicago truncatula
Medtr3g115920 2.0kb upstream 2.0kb upstream 5963 true chr3: 54180220-54186182 Medicago truncatula
Medtr3g115920 2.0kb upstream 2.0kb upstream 2000 false chr3: 54184183-54186182 Medicago truncatula
Medtr3g115920 2.0kb downstream 2.0kb downstream 5963 true chr3: 54178220-54184182 Medicago truncatula
Medtr3g115920 2.0kb downstream 2.0kb downstream 2000 false chr3: 54178220-54180219 Medicago truncatula
Medtr3g115920 5.0kb upstream 5.0kb upstream 8963 true chr3: 54180220-54189182 Medicago truncatula
Medtr3g115920 5.0kb upstream 5.0kb upstream 5000 false chr3: 54184183-54189182 Medicago truncatula
Medtr3g115920 5.0kb downstream 5.0kb downstream 8963 true chr3: 54175220-54184182 Medicago truncatula
Medtr3g115920 5.0kb downstream 5.0kb downstream 5000 false chr3: 54175220-54180219 Medicago truncatula
Medtr3g115920 10.0kb upstream 10.0kb upstream 13963 true chr3: 54180220-54194182 Medicago truncatula
Medtr3g115920 10.0kb upstream 10.0kb upstream 10000 false chr3: 54184183-54194182 Medicago truncatula
Medtr3g115920 10.0kb downstream 10.0kb downstream 13963 true chr3: 54170220-54184182 Medicago truncatula
Medtr3g115920 10.0kb downstream 10.0kb downstream 10000 false chr3: 54170220-54180219 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300267 5265 Fabidae View MSA
124062072 5270 Rosid View MSA
123746514 5271 Pentapetalae View MSA
122796484 5272 Eudicot View MSA
122047323 5273 Angiosperm View MSA
121310728 5274 Embryophyte View MSA
123425156 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.022     Low  
cufflinks 165.116     High High
cufflinks 60.656     High  
cufflinks 0.011     Low Low
cufflinks 108.731     High  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.061     Low  
cufflinks 117.303     High  
cufflinks 0.045     Low  

0 Strain