Gene : Medtr3g116640 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR27000:SF96 - LEUCINE-RICH REPEAT PROTEIN KINASE-LIKE PROTEIN Description:  LRR receptor-like kinase family protein
Genomic Order:  6614 Name:  ? Medtr3g116640
Secondary Identifier:  ? PAC:31054601
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g116640 0.5kb upstream 0.5kb upstream 6359 true chr3: 54549773-54556131 Medicago truncatula
Medtr3g116640 0.5kb upstream 0.5kb upstream 500 false chr3: 54555632-54556131 Medicago truncatula
Medtr3g116640 0.5kb downstream 0.5kb downstream 6359 true chr3: 54549273-54555631 Medicago truncatula
Medtr3g116640 0.5kb downstream 0.5kb downstream 500 false chr3: 54549273-54549772 Medicago truncatula
Medtr3g116640 1.0kb upstream 1.0kb upstream 6859 true chr3: 54549773-54556631 Medicago truncatula
Medtr3g116640 1.0kb upstream 1.0kb upstream 1000 false chr3: 54555632-54556631 Medicago truncatula
Medtr3g116640 1.0kb downstream 1.0kb downstream 6859 true chr3: 54548773-54555631 Medicago truncatula
Medtr3g116640 1.0kb downstream 1.0kb downstream 1000 false chr3: 54548773-54549772 Medicago truncatula
Medtr3g116640 2.0kb upstream 2.0kb upstream 7859 true chr3: 54549773-54557631 Medicago truncatula
Medtr3g116640 2.0kb upstream 2.0kb upstream 2000 false chr3: 54555632-54557631 Medicago truncatula
Medtr3g116640 2.0kb downstream 2.0kb downstream 7859 true chr3: 54547773-54555631 Medicago truncatula
Medtr3g116640 2.0kb downstream 2.0kb downstream 2000 false chr3: 54547773-54549772 Medicago truncatula
Medtr3g116640 5.0kb upstream 5.0kb upstream 10859 true chr3: 54549773-54560631 Medicago truncatula
Medtr3g116640 5.0kb upstream 5.0kb upstream 5000 false chr3: 54555632-54560631 Medicago truncatula
Medtr3g116640 5.0kb downstream 5.0kb downstream 10859 true chr3: 54544773-54555631 Medicago truncatula
Medtr3g116640 5.0kb downstream 5.0kb downstream 5000 false chr3: 54544773-54549772 Medicago truncatula
Medtr3g116640 10.0kb upstream 10.0kb upstream 15859 true chr3: 54549773-54565631 Medicago truncatula
Medtr3g116640 10.0kb upstream 10.0kb upstream 10000 false chr3: 54555632-54565631 Medicago truncatula
Medtr3g116640 10.0kb downstream 10.0kb downstream 15859 true chr3: 54539773-54555631 Medicago truncatula
Medtr3g116640 10.0kb downstream 10.0kb downstream 10000 false chr3: 54539773-54549772 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314352 5265 Fabidae View MSA
124071845 5270 Rosid View MSA
123751377 5271 Pentapetalae View MSA
122793717 5272 Eudicot View MSA
122043581 5273 Angiosperm View MSA
121347798 5274 Embryophyte View MSA
123380630 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.434        
cufflinks 0.583        
cufflinks 0.628        
cufflinks 0.576        
cufflinks 0.92       High
cufflinks 0.341       Low
cufflinks 0.891       High
cufflinks 0.406       Low
cufflinks 0.662        

0 Strain