Gene : Medtr3g116690 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR21717//PTHR21717:SF22 - TELOMERIC REPEAT BINDING PROTEIN Description:  myb-like DNA-binding domain protein
Genomic Order:  6617 Name:  ? Medtr3g116690
Secondary Identifier:  ? PAC:31058280
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g116690 0.5kb upstream 0.5kb upstream 3289 true chr3: 54570675-54573963 Medicago truncatula
Medtr3g116690 0.5kb upstream 0.5kb upstream 500 false chr3: 54570675-54571174 Medicago truncatula
Medtr3g116690 0.5kb downstream 0.5kb downstream 3289 true chr3: 54571175-54574463 Medicago truncatula
Medtr3g116690 0.5kb downstream 0.5kb downstream 500 false chr3: 54573964-54574463 Medicago truncatula
Medtr3g116690 1.0kb upstream 1.0kb upstream 3789 true chr3: 54570175-54573963 Medicago truncatula
Medtr3g116690 1.0kb upstream 1.0kb upstream 1000 false chr3: 54570175-54571174 Medicago truncatula
Medtr3g116690 1.0kb downstream 1.0kb downstream 3789 true chr3: 54571175-54574963 Medicago truncatula
Medtr3g116690 1.0kb downstream 1.0kb downstream 1000 false chr3: 54573964-54574963 Medicago truncatula
Medtr3g116690 2.0kb upstream 2.0kb upstream 4789 true chr3: 54569175-54573963 Medicago truncatula
Medtr3g116690 2.0kb upstream 2.0kb upstream 2000 false chr3: 54569175-54571174 Medicago truncatula
Medtr3g116690 2.0kb downstream 2.0kb downstream 4789 true chr3: 54571175-54575963 Medicago truncatula
Medtr3g116690 2.0kb downstream 2.0kb downstream 2000 false chr3: 54573964-54575963 Medicago truncatula
Medtr3g116690 5.0kb upstream 5.0kb upstream 7789 true chr3: 54566175-54573963 Medicago truncatula
Medtr3g116690 5.0kb upstream 5.0kb upstream 5000 false chr3: 54566175-54571174 Medicago truncatula
Medtr3g116690 5.0kb downstream 5.0kb downstream 7789 true chr3: 54571175-54578963 Medicago truncatula
Medtr3g116690 5.0kb downstream 5.0kb downstream 5000 false chr3: 54573964-54578963 Medicago truncatula
Medtr3g116690 10.0kb upstream 10.0kb upstream 12789 true chr3: 54561175-54573963 Medicago truncatula
Medtr3g116690 10.0kb upstream 10.0kb upstream 10000 false chr3: 54561175-54571174 Medicago truncatula
Medtr3g116690 10.0kb downstream 10.0kb downstream 12789 true chr3: 54571175-54583963 Medicago truncatula
Medtr3g116690 10.0kb downstream 10.0kb downstream 10000 false chr3: 54573964-54583963 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296429 5265 Fabidae View MSA
124067542 5270 Rosid View MSA
123751765 5271 Pentapetalae View MSA
122796417 5272 Eudicot View MSA
122048444 5273 Angiosperm View MSA
121347141 5274 Embryophyte View MSA
123425851 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.06     Low  
cufflinks 0.045     Low  
cufflinks 0.07     Low  
cufflinks 0.008     Low Low
cufflinks 0.138       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.057     Low  
cufflinks 0.066        
cufflinks 0.037     Low  

0 Strain