Gene : Medtr3g116480 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10261 - COATOMER SUBUNIT GAMMA Description:  coatomer subunit gamma-like protein
Genomic Order:  6605 Name:  ? Medtr3g116480
Secondary Identifier:  ? PAC:31057974
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g116480 0.5kb upstream 0.5kb upstream 9873 true chr3: 54482235-54492107 Medicago truncatula
Medtr3g116480 0.5kb upstream 0.5kb upstream 500 false chr3: 54482235-54482734 Medicago truncatula
Medtr3g116480 0.5kb downstream 0.5kb downstream 9873 true chr3: 54482735-54492607 Medicago truncatula
Medtr3g116480 0.5kb downstream 0.5kb downstream 500 false chr3: 54492108-54492607 Medicago truncatula
Medtr3g116480 1.0kb upstream 1.0kb upstream 10373 true chr3: 54481735-54492107 Medicago truncatula
Medtr3g116480 1.0kb upstream 1.0kb upstream 1000 false chr3: 54481735-54482734 Medicago truncatula
Medtr3g116480 1.0kb downstream 1.0kb downstream 10373 true chr3: 54482735-54493107 Medicago truncatula
Medtr3g116480 1.0kb downstream 1.0kb downstream 1000 false chr3: 54492108-54493107 Medicago truncatula
Medtr3g116480 2.0kb upstream 2.0kb upstream 11373 true chr3: 54480735-54492107 Medicago truncatula
Medtr3g116480 2.0kb upstream 2.0kb upstream 2000 false chr3: 54480735-54482734 Medicago truncatula
Medtr3g116480 2.0kb downstream 2.0kb downstream 11373 true chr3: 54482735-54494107 Medicago truncatula
Medtr3g116480 2.0kb downstream 2.0kb downstream 2000 false chr3: 54492108-54494107 Medicago truncatula
Medtr3g116480 5.0kb upstream 5.0kb upstream 14373 true chr3: 54477735-54492107 Medicago truncatula
Medtr3g116480 5.0kb upstream 5.0kb upstream 5000 false chr3: 54477735-54482734 Medicago truncatula
Medtr3g116480 5.0kb downstream 5.0kb downstream 14373 true chr3: 54482735-54497107 Medicago truncatula
Medtr3g116480 5.0kb downstream 5.0kb downstream 5000 false chr3: 54492108-54497107 Medicago truncatula
Medtr3g116480 10.0kb upstream 10.0kb upstream 19373 true chr3: 54472735-54492107 Medicago truncatula
Medtr3g116480 10.0kb upstream 10.0kb upstream 10000 false chr3: 54472735-54482734 Medicago truncatula
Medtr3g116480 10.0kb downstream 10.0kb downstream 19373 true chr3: 54482735-54502107 Medicago truncatula
Medtr3g116480 10.0kb downstream 10.0kb downstream 10000 false chr3: 54492108-54502107 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313608 5265 Fabidae View MSA
124064996 5270 Rosid View MSA
123745715 5271 Pentapetalae View MSA
122789783 5272 Eudicot View MSA
122043525 5273 Angiosperm View MSA
121350751 5274 Embryophyte View MSA
123428143 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.998        
cufflinks 5.912        
cufflinks 4.854        
cufflinks 2.609       Low
cufflinks 7.185        
cufflinks 1.527       Low
cufflinks 5.625        
cufflinks 4.503        
cufflinks 7.437        

0 Strain