Gene : Medtr3g116320 M. truncatula Mt4.0v1
Defline:  (1 of 52) PF03181 - BURP domain (BURP) Description:  dehydration-responsive RD22-like protein
Genomic Order:  6596 Name:  ? Medtr3g116320
Secondary Identifier:  ? PAC:31056224
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g116320 0.5kb upstream 0.5kb upstream 3841 true chr3: 54395841-54399681 Medicago truncatula
Medtr3g116320 0.5kb upstream 0.5kb upstream 500 false chr3: 54399182-54399681 Medicago truncatula
Medtr3g116320 0.5kb downstream 0.5kb downstream 3841 true chr3: 54395341-54399181 Medicago truncatula
Medtr3g116320 0.5kb downstream 0.5kb downstream 500 false chr3: 54395341-54395840 Medicago truncatula
Medtr3g116320 1.0kb upstream 1.0kb upstream 4341 true chr3: 54395841-54400181 Medicago truncatula
Medtr3g116320 1.0kb upstream 1.0kb upstream 1000 false chr3: 54399182-54400181 Medicago truncatula
Medtr3g116320 1.0kb downstream 1.0kb downstream 4341 true chr3: 54394841-54399181 Medicago truncatula
Medtr3g116320 1.0kb downstream 1.0kb downstream 1000 false chr3: 54394841-54395840 Medicago truncatula
Medtr3g116320 2.0kb upstream 2.0kb upstream 5341 true chr3: 54395841-54401181 Medicago truncatula
Medtr3g116320 2.0kb upstream 2.0kb upstream 2000 false chr3: 54399182-54401181 Medicago truncatula
Medtr3g116320 2.0kb downstream 2.0kb downstream 5341 true chr3: 54393841-54399181 Medicago truncatula
Medtr3g116320 2.0kb downstream 2.0kb downstream 2000 false chr3: 54393841-54395840 Medicago truncatula
Medtr3g116320 5.0kb upstream 5.0kb upstream 8341 true chr3: 54395841-54404181 Medicago truncatula
Medtr3g116320 5.0kb upstream 5.0kb upstream 5000 false chr3: 54399182-54404181 Medicago truncatula
Medtr3g116320 5.0kb downstream 5.0kb downstream 8341 true chr3: 54390841-54399181 Medicago truncatula
Medtr3g116320 5.0kb downstream 5.0kb downstream 5000 false chr3: 54390841-54395840 Medicago truncatula
Medtr3g116320 10.0kb upstream 10.0kb upstream 13341 true chr3: 54395841-54409181 Medicago truncatula
Medtr3g116320 10.0kb upstream 10.0kb upstream 10000 false chr3: 54399182-54409181 Medicago truncatula
Medtr3g116320 10.0kb downstream 10.0kb downstream 13341 true chr3: 54385841-54399181 Medicago truncatula
Medtr3g116320 10.0kb downstream 10.0kb downstream 10000 false chr3: 54385841-54395840 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122287950 5265 Fabidae View MSA
124075516 5270 Rosid View MSA
123628890 5271 Pentapetalae View MSA
122663128 5272 Eudicot View MSA
122050943 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.286        
cufflinks 2.84        
cufflinks 7.04       High
cufflinks 0.051     Low Low
cufflinks 2.206        
cufflinks 0.201        
cufflinks 0.066     Low Low
cufflinks 3.015        
cufflinks 0.084     Low  

0 Strain