Gene : Medtr3g116200 M. truncatula Mt4.0v1
Defline:  (1 of 1) KOG2744 - DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain Description:  ARID/bright DNA-binding domain protein
Genomic Order:  6587 Name:  ? Medtr3g116200
Secondary Identifier:  ? PAC:31060871
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g116200 0.5kb upstream 0.5kb upstream 6616 true chr3: 54323677-54330292 Medicago truncatula
Medtr3g116200 0.5kb upstream 0.5kb upstream 500 false chr3: 54329793-54330292 Medicago truncatula
Medtr3g116200 0.5kb downstream 0.5kb downstream 6616 true chr3: 54323177-54329792 Medicago truncatula
Medtr3g116200 0.5kb downstream 0.5kb downstream 500 false chr3: 54323177-54323676 Medicago truncatula
Medtr3g116200 1.0kb upstream 1.0kb upstream 7116 true chr3: 54323677-54330792 Medicago truncatula
Medtr3g116200 1.0kb upstream 1.0kb upstream 1000 false chr3: 54329793-54330792 Medicago truncatula
Medtr3g116200 1.0kb downstream 1.0kb downstream 7116 true chr3: 54322677-54329792 Medicago truncatula
Medtr3g116200 1.0kb downstream 1.0kb downstream 1000 false chr3: 54322677-54323676 Medicago truncatula
Medtr3g116200 2.0kb upstream 2.0kb upstream 8116 true chr3: 54323677-54331792 Medicago truncatula
Medtr3g116200 2.0kb upstream 2.0kb upstream 2000 false chr3: 54329793-54331792 Medicago truncatula
Medtr3g116200 2.0kb downstream 2.0kb downstream 8116 true chr3: 54321677-54329792 Medicago truncatula
Medtr3g116200 2.0kb downstream 2.0kb downstream 2000 false chr3: 54321677-54323676 Medicago truncatula
Medtr3g116200 5.0kb upstream 5.0kb upstream 11116 true chr3: 54323677-54334792 Medicago truncatula
Medtr3g116200 5.0kb upstream 5.0kb upstream 5000 false chr3: 54329793-54334792 Medicago truncatula
Medtr3g116200 5.0kb downstream 5.0kb downstream 11116 true chr3: 54318677-54329792 Medicago truncatula
Medtr3g116200 5.0kb downstream 5.0kb downstream 5000 false chr3: 54318677-54323676 Medicago truncatula
Medtr3g116200 10.0kb upstream 10.0kb upstream 16116 true chr3: 54323677-54339792 Medicago truncatula
Medtr3g116200 10.0kb upstream 10.0kb upstream 10000 false chr3: 54329793-54339792 Medicago truncatula
Medtr3g116200 10.0kb downstream 10.0kb downstream 16116 true chr3: 54313677-54329792 Medicago truncatula
Medtr3g116200 10.0kb downstream 10.0kb downstream 10000 false chr3: 54313677-54323676 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301637 5265 Fabidae View MSA
124071452 5270 Rosid View MSA
123742990 5271 Pentapetalae View MSA
122787773 5272 Eudicot View MSA
122045434 5273 Angiosperm View MSA
121346901 5274 Embryophyte View MSA
123426327 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.603        
cufflinks 0.634        
cufflinks 0.551        
cufflinks 0.238        
cufflinks 1.336       High
cufflinks 0.072     Low Low
cufflinks 0.357        
cufflinks 0.563        
cufflinks 0.585        

0 Strain