Gene : Medtr3g116410 M. truncatula Mt4.0v1
Defline:  (1 of 52) PF03181 - BURP domain (BURP) Description:  dehydration-responsive RD22-like protein
Genomic Order:  6599 Name:  ? Medtr3g116410
Secondary Identifier:  ? PAC:31057477
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g116410 0.5kb upstream 0.5kb upstream 1893 true chr3: 54448386-54450278 Medicago truncatula
Medtr3g116410 0.5kb upstream 0.5kb upstream 500 false chr3: 54449779-54450278 Medicago truncatula
Medtr3g116410 0.5kb downstream 0.5kb downstream 1893 true chr3: 54447886-54449778 Medicago truncatula
Medtr3g116410 0.5kb downstream 0.5kb downstream 500 false chr3: 54447886-54448385 Medicago truncatula
Medtr3g116410 1.0kb upstream 1.0kb upstream 2393 true chr3: 54448386-54450778 Medicago truncatula
Medtr3g116410 1.0kb upstream 1.0kb upstream 1000 false chr3: 54449779-54450778 Medicago truncatula
Medtr3g116410 1.0kb downstream 1.0kb downstream 2393 true chr3: 54447386-54449778 Medicago truncatula
Medtr3g116410 1.0kb downstream 1.0kb downstream 1000 false chr3: 54447386-54448385 Medicago truncatula
Medtr3g116410 2.0kb upstream 2.0kb upstream 3393 true chr3: 54448386-54451778 Medicago truncatula
Medtr3g116410 2.0kb upstream 2.0kb upstream 2000 false chr3: 54449779-54451778 Medicago truncatula
Medtr3g116410 2.0kb downstream 2.0kb downstream 3393 true chr3: 54446386-54449778 Medicago truncatula
Medtr3g116410 2.0kb downstream 2.0kb downstream 2000 false chr3: 54446386-54448385 Medicago truncatula
Medtr3g116410 5.0kb upstream 5.0kb upstream 6393 true chr3: 54448386-54454778 Medicago truncatula
Medtr3g116410 5.0kb upstream 5.0kb upstream 5000 false chr3: 54449779-54454778 Medicago truncatula
Medtr3g116410 5.0kb downstream 5.0kb downstream 6393 true chr3: 54443386-54449778 Medicago truncatula
Medtr3g116410 5.0kb downstream 5.0kb downstream 5000 false chr3: 54443386-54448385 Medicago truncatula
Medtr3g116410 10.0kb upstream 10.0kb upstream 11393 true chr3: 54448386-54459778 Medicago truncatula
Medtr3g116410 10.0kb upstream 10.0kb upstream 10000 false chr3: 54449779-54459778 Medicago truncatula
Medtr3g116410 10.0kb downstream 10.0kb downstream 11393 true chr3: 54438386-54449778 Medicago truncatula
Medtr3g116410 10.0kb downstream 10.0kb downstream 10000 false chr3: 54438386-54448385 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313235 5265 Fabidae View MSA
124069569 5270 Rosid View MSA
123746608 5271 Pentapetalae View MSA
122797673 5272 Eudicot View MSA
122050943 5273 Angiosperm View MSA
121351029 5274 Embryophyte View MSA
123381981 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.394       Low
cufflinks 2.63        
cufflinks 0.944        
cufflinks 4.067        
cufflinks 1.063        
cufflinks 2.905        
cufflinks 11.265     High High
cufflinks 2.145        
cufflinks 4.017        

0 Strain