Gene : Medtr3g117120 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR22952//PTHR22952:SF182 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Description:  BZIP transcription factor bZIP124
Genomic Order:  6651 Name:  ? Medtr3g117120
Secondary Identifier:  ? PAC:31053621
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g117120 0.5kb upstream 0.5kb upstream 1875 true chr3: 54790083-54791957 Medicago truncatula
Medtr3g117120 0.5kb upstream 0.5kb upstream 500 false chr3: 54790083-54790582 Medicago truncatula
Medtr3g117120 0.5kb downstream 0.5kb downstream 1875 true chr3: 54790583-54792457 Medicago truncatula
Medtr3g117120 0.5kb downstream 0.5kb downstream 500 false chr3: 54791958-54792457 Medicago truncatula
Medtr3g117120 1.0kb upstream 1.0kb upstream 2375 true chr3: 54789583-54791957 Medicago truncatula
Medtr3g117120 1.0kb upstream 1.0kb upstream 1000 false chr3: 54789583-54790582 Medicago truncatula
Medtr3g117120 1.0kb downstream 1.0kb downstream 2375 true chr3: 54790583-54792957 Medicago truncatula
Medtr3g117120 1.0kb downstream 1.0kb downstream 1000 false chr3: 54791958-54792957 Medicago truncatula
Medtr3g117120 2.0kb upstream 2.0kb upstream 3375 true chr3: 54788583-54791957 Medicago truncatula
Medtr3g117120 2.0kb upstream 2.0kb upstream 2000 false chr3: 54788583-54790582 Medicago truncatula
Medtr3g117120 2.0kb downstream 2.0kb downstream 3375 true chr3: 54790583-54793957 Medicago truncatula
Medtr3g117120 2.0kb downstream 2.0kb downstream 2000 false chr3: 54791958-54793957 Medicago truncatula
Medtr3g117120 5.0kb upstream 5.0kb upstream 6375 true chr3: 54785583-54791957 Medicago truncatula
Medtr3g117120 5.0kb upstream 5.0kb upstream 5000 false chr3: 54785583-54790582 Medicago truncatula
Medtr3g117120 5.0kb downstream 5.0kb downstream 6375 true chr3: 54790583-54796957 Medicago truncatula
Medtr3g117120 5.0kb downstream 5.0kb downstream 5000 false chr3: 54791958-54796957 Medicago truncatula
Medtr3g117120 10.0kb upstream 10.0kb upstream 11375 true chr3: 54780583-54791957 Medicago truncatula
Medtr3g117120 10.0kb upstream 10.0kb upstream 10000 false chr3: 54780583-54790582 Medicago truncatula
Medtr3g117120 10.0kb downstream 10.0kb downstream 11375 true chr3: 54790583-54801957 Medicago truncatula
Medtr3g117120 10.0kb downstream 10.0kb downstream 10000 false chr3: 54791958-54801957 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295155 5265 Fabidae View MSA
124069594 5270 Rosid View MSA
123751386 5271 Pentapetalae View MSA
122786761 5272 Eudicot View MSA
122045115 5273 Angiosperm View MSA
123428996 5275 Viridiplantae View MSA
121349851 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.562     High  
cufflinks 6.121       Low
cufflinks 7.86        
cufflinks 27.232     High  
cufflinks 11.624     High  
cufflinks 42.058     High  
cufflinks 53.945     High  
cufflinks 3.866       Low
cufflinks 73.631     High High

0 Strain