Gene : Medtr3g117210 M. truncatula Mt4.0v1
Defline:  (1 of 5) PTHR13822:SF8 - ATP SYNTHASE EPSILON CHAIN, CHLOROPLASTIC Description:  ATP synthase, delta/epsilon chain, long alpha-helix protein
Genomic Order:  6658 Name:  ? Medtr3g117210
Secondary Identifier:  ? PAC:31059734
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g117210 0.5kb upstream 0.5kb upstream 890 true chr3: 54833854-54834743 Medicago truncatula
Medtr3g117210 0.5kb upstream 0.5kb upstream 500 false chr3: 54833854-54834353 Medicago truncatula
Medtr3g117210 0.5kb downstream 0.5kb downstream 890 true chr3: 54834354-54835243 Medicago truncatula
Medtr3g117210 0.5kb downstream 0.5kb downstream 500 false chr3: 54834744-54835243 Medicago truncatula
Medtr3g117210 1.0kb upstream 1.0kb upstream 1390 true chr3: 54833354-54834743 Medicago truncatula
Medtr3g117210 1.0kb upstream 1.0kb upstream 1000 false chr3: 54833354-54834353 Medicago truncatula
Medtr3g117210 1.0kb downstream 1.0kb downstream 1390 true chr3: 54834354-54835743 Medicago truncatula
Medtr3g117210 1.0kb downstream 1.0kb downstream 1000 false chr3: 54834744-54835743 Medicago truncatula
Medtr3g117210 2.0kb upstream 2.0kb upstream 2390 true chr3: 54832354-54834743 Medicago truncatula
Medtr3g117210 2.0kb upstream 2.0kb upstream 2000 false chr3: 54832354-54834353 Medicago truncatula
Medtr3g117210 2.0kb downstream 2.0kb downstream 2390 true chr3: 54834354-54836743 Medicago truncatula
Medtr3g117210 2.0kb downstream 2.0kb downstream 2000 false chr3: 54834744-54836743 Medicago truncatula
Medtr3g117210 5.0kb upstream 5.0kb upstream 5390 true chr3: 54829354-54834743 Medicago truncatula
Medtr3g117210 5.0kb upstream 5.0kb upstream 5000 false chr3: 54829354-54834353 Medicago truncatula
Medtr3g117210 5.0kb downstream 5.0kb downstream 5390 true chr3: 54834354-54839743 Medicago truncatula
Medtr3g117210 5.0kb downstream 5.0kb downstream 5000 false chr3: 54834744-54839743 Medicago truncatula
Medtr3g117210 10.0kb upstream 10.0kb upstream 10390 true chr3: 54824354-54834743 Medicago truncatula
Medtr3g117210 10.0kb upstream 10.0kb upstream 10000 false chr3: 54824354-54834353 Medicago truncatula
Medtr3g117210 10.0kb downstream 10.0kb downstream 10390 true chr3: 54834354-54844743 Medicago truncatula
Medtr3g117210 10.0kb downstream 10.0kb downstream 10000 false chr3: 54834744-54844743 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121783750 5273 Angiosperm View MSA
122260701 5265 Fabidae Singleton cluster - no MSA
124002069 5270 Rosid Singleton cluster - no MSA
123755460 5271 Pentapetalae View MSA
122776717 5272 Eudicot View MSA
121055197 5274 Embryophyte View MSA
123095142 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain