Gene : Medtr3g116810 M. truncatula Mt4.0v1
Description:  hypothetical protein Genomic Order:  6625
Name:  ? Medtr3g116810 Secondary Identifier:  ? PAC:31055650
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g116810 0.5kb upstream 0.5kb upstream 1804 true chr3: 54630431-54632234 Medicago truncatula
Medtr3g116810 0.5kb upstream 0.5kb upstream 500 false chr3: 54630431-54630930 Medicago truncatula
Medtr3g116810 0.5kb downstream 0.5kb downstream 1804 true chr3: 54630931-54632734 Medicago truncatula
Medtr3g116810 0.5kb downstream 0.5kb downstream 500 false chr3: 54632235-54632734 Medicago truncatula
Medtr3g116810 1.0kb upstream 1.0kb upstream 2304 true chr3: 54629931-54632234 Medicago truncatula
Medtr3g116810 1.0kb upstream 1.0kb upstream 1000 false chr3: 54629931-54630930 Medicago truncatula
Medtr3g116810 1.0kb downstream 1.0kb downstream 2304 true chr3: 54630931-54633234 Medicago truncatula
Medtr3g116810 1.0kb downstream 1.0kb downstream 1000 false chr3: 54632235-54633234 Medicago truncatula
Medtr3g116810 2.0kb upstream 2.0kb upstream 3304 true chr3: 54628931-54632234 Medicago truncatula
Medtr3g116810 2.0kb upstream 2.0kb upstream 2000 false chr3: 54628931-54630930 Medicago truncatula
Medtr3g116810 2.0kb downstream 2.0kb downstream 3304 true chr3: 54630931-54634234 Medicago truncatula
Medtr3g116810 2.0kb downstream 2.0kb downstream 2000 false chr3: 54632235-54634234 Medicago truncatula
Medtr3g116810 5.0kb upstream 5.0kb upstream 6304 true chr3: 54625931-54632234 Medicago truncatula
Medtr3g116810 5.0kb upstream 5.0kb upstream 5000 false chr3: 54625931-54630930 Medicago truncatula
Medtr3g116810 5.0kb downstream 5.0kb downstream 6304 true chr3: 54630931-54637234 Medicago truncatula
Medtr3g116810 5.0kb downstream 5.0kb downstream 5000 false chr3: 54632235-54637234 Medicago truncatula
Medtr3g116810 10.0kb upstream 10.0kb upstream 11304 true chr3: 54620931-54632234 Medicago truncatula
Medtr3g116810 10.0kb upstream 10.0kb upstream 10000 false chr3: 54620931-54630930 Medicago truncatula
Medtr3g116810 10.0kb downstream 10.0kb downstream 11304 true chr3: 54630931-54642234 Medicago truncatula
Medtr3g116810 10.0kb downstream 10.0kb downstream 10000 false chr3: 54632235-54642234 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780321 5273 Angiosperm View MSA
122311440 5265 Fabidae View MSA
124072168 5270 Rosid View MSA
123745842 5271 Pentapetalae View MSA
122771668 5272 Eudicot View MSA
121051939 5274 Embryophyte View MSA
123092007 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.74     High High
cufflinks 6.9        
cufflinks 9.164        
cufflinks 12.801     High  
cufflinks 7.906        
cufflinks 9.715        
cufflinks 12.203     High  
cufflinks 8.051        
cufflinks 8.118        

0 Strain