Gene : Medtr3g116950 M. truncatula Mt4.0v1
Defline:  (1 of 33) PF03087 - Arabidopsis protein of unknown function (DUF241) Description:  DUF241 domain protein
Genomic Order:  6636 Name:  ? Medtr3g116950
Secondary Identifier:  ? PAC:31058334
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g116950 0.5kb upstream 0.5kb upstream 1590 true chr3: 54699783-54701372 Medicago truncatula
Medtr3g116950 0.5kb upstream 0.5kb upstream 500 false chr3: 54700873-54701372 Medicago truncatula
Medtr3g116950 0.5kb downstream 0.5kb downstream 1590 true chr3: 54699283-54700872 Medicago truncatula
Medtr3g116950 0.5kb downstream 0.5kb downstream 500 false chr3: 54699283-54699782 Medicago truncatula
Medtr3g116950 1.0kb upstream 1.0kb upstream 2090 true chr3: 54699783-54701872 Medicago truncatula
Medtr3g116950 1.0kb upstream 1.0kb upstream 1000 false chr3: 54700873-54701872 Medicago truncatula
Medtr3g116950 1.0kb downstream 1.0kb downstream 2090 true chr3: 54698783-54700872 Medicago truncatula
Medtr3g116950 1.0kb downstream 1.0kb downstream 1000 false chr3: 54698783-54699782 Medicago truncatula
Medtr3g116950 2.0kb upstream 2.0kb upstream 3090 true chr3: 54699783-54702872 Medicago truncatula
Medtr3g116950 2.0kb upstream 2.0kb upstream 2000 false chr3: 54700873-54702872 Medicago truncatula
Medtr3g116950 2.0kb downstream 2.0kb downstream 3090 true chr3: 54697783-54700872 Medicago truncatula
Medtr3g116950 2.0kb downstream 2.0kb downstream 2000 false chr3: 54697783-54699782 Medicago truncatula
Medtr3g116950 5.0kb upstream 5.0kb upstream 6090 true chr3: 54699783-54705872 Medicago truncatula
Medtr3g116950 5.0kb upstream 5.0kb upstream 5000 false chr3: 54700873-54705872 Medicago truncatula
Medtr3g116950 5.0kb downstream 5.0kb downstream 6090 true chr3: 54694783-54700872 Medicago truncatula
Medtr3g116950 5.0kb downstream 5.0kb downstream 5000 false chr3: 54694783-54699782 Medicago truncatula
Medtr3g116950 10.0kb upstream 10.0kb upstream 11090 true chr3: 54699783-54710872 Medicago truncatula
Medtr3g116950 10.0kb upstream 10.0kb upstream 10000 false chr3: 54700873-54710872 Medicago truncatula
Medtr3g116950 10.0kb downstream 10.0kb downstream 11090 true chr3: 54689783-54700872 Medicago truncatula
Medtr3g116950 10.0kb downstream 10.0kb downstream 10000 false chr3: 54689783-54699782 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311917 5265 Fabidae View MSA
124063899 5270 Rosid View MSA
123753428 5271 Pentapetalae View MSA
122797760 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.125        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.019       High

0 Strain