Gene : Medtr3g116920 M. truncatula Mt4.0v1
Defline:  (1 of 33) PF03087 - Arabidopsis protein of unknown function (DUF241) Description:  DUF241 domain protein
Genomic Order:  6633 Name:  ? Medtr3g116920
Secondary Identifier:  ? PAC:31059630
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g116920 0.5kb upstream 0.5kb upstream 1527 true chr3: 54687788-54689314 Medicago truncatula
Medtr3g116920 0.5kb upstream 0.5kb upstream 500 false chr3: 54688815-54689314 Medicago truncatula
Medtr3g116920 0.5kb downstream 0.5kb downstream 1527 true chr3: 54687288-54688814 Medicago truncatula
Medtr3g116920 0.5kb downstream 0.5kb downstream 500 false chr3: 54687288-54687787 Medicago truncatula
Medtr3g116920 1.0kb upstream 1.0kb upstream 2027 true chr3: 54687788-54689814 Medicago truncatula
Medtr3g116920 1.0kb upstream 1.0kb upstream 1000 false chr3: 54688815-54689814 Medicago truncatula
Medtr3g116920 1.0kb downstream 1.0kb downstream 2027 true chr3: 54686788-54688814 Medicago truncatula
Medtr3g116920 1.0kb downstream 1.0kb downstream 1000 false chr3: 54686788-54687787 Medicago truncatula
Medtr3g116920 2.0kb upstream 2.0kb upstream 3027 true chr3: 54687788-54690814 Medicago truncatula
Medtr3g116920 2.0kb upstream 2.0kb upstream 2000 false chr3: 54688815-54690814 Medicago truncatula
Medtr3g116920 2.0kb downstream 2.0kb downstream 3027 true chr3: 54685788-54688814 Medicago truncatula
Medtr3g116920 2.0kb downstream 2.0kb downstream 2000 false chr3: 54685788-54687787 Medicago truncatula
Medtr3g116920 5.0kb upstream 5.0kb upstream 6027 true chr3: 54687788-54693814 Medicago truncatula
Medtr3g116920 5.0kb upstream 5.0kb upstream 5000 false chr3: 54688815-54693814 Medicago truncatula
Medtr3g116920 5.0kb downstream 5.0kb downstream 6027 true chr3: 54682788-54688814 Medicago truncatula
Medtr3g116920 5.0kb downstream 5.0kb downstream 5000 false chr3: 54682788-54687787 Medicago truncatula
Medtr3g116920 10.0kb upstream 10.0kb upstream 11027 true chr3: 54687788-54698814 Medicago truncatula
Medtr3g116920 10.0kb upstream 10.0kb upstream 10000 false chr3: 54688815-54698814 Medicago truncatula
Medtr3g116920 10.0kb downstream 10.0kb downstream 11027 true chr3: 54677788-54688814 Medicago truncatula
Medtr3g116920 10.0kb downstream 10.0kb downstream 10000 false chr3: 54677788-54687787 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311917 5265 Fabidae View MSA
124063899 5270 Rosid View MSA
123753428 5271 Pentapetalae View MSA
122797760 5272 Eudicot View MSA
122043809 5273 Angiosperm View MSA
121310191 5274 Embryophyte View MSA
123347751 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low  
cufflinks 0.015     Low  
cufflinks 0.074     Low  
cufflinks 0.089        
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.117        
cufflinks 0.042     Low  
cufflinks 0.605       High

0 Strain