Gene : Medtr3g117790 M. truncatula Mt4.0v1
Defline:  (1 of 3) PTHR21717//PTHR21717:SF22 - TELOMERIC REPEAT BINDING PROTEIN Description:  myb-like DNA-binding domain protein
Genomic Order:  6702 Name:  ? Medtr3g117790
Secondary Identifier:  ? PAC:31056369
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g117790 0.5kb upstream 0.5kb upstream 2944 true chr3: 55154359-55157302 Medicago truncatula
Medtr3g117790 0.5kb upstream 0.5kb upstream 500 false chr3: 55154359-55154858 Medicago truncatula
Medtr3g117790 0.5kb downstream 0.5kb downstream 2944 true chr3: 55154859-55157802 Medicago truncatula
Medtr3g117790 0.5kb downstream 0.5kb downstream 500 false chr3: 55157303-55157802 Medicago truncatula
Medtr3g117790 1.0kb upstream 1.0kb upstream 3444 true chr3: 55153859-55157302 Medicago truncatula
Medtr3g117790 1.0kb upstream 1.0kb upstream 1000 false chr3: 55153859-55154858 Medicago truncatula
Medtr3g117790 1.0kb downstream 1.0kb downstream 3444 true chr3: 55154859-55158302 Medicago truncatula
Medtr3g117790 1.0kb downstream 1.0kb downstream 1000 false chr3: 55157303-55158302 Medicago truncatula
Medtr3g117790 2.0kb upstream 2.0kb upstream 4444 true chr3: 55152859-55157302 Medicago truncatula
Medtr3g117790 2.0kb upstream 2.0kb upstream 2000 false chr3: 55152859-55154858 Medicago truncatula
Medtr3g117790 2.0kb downstream 2.0kb downstream 4444 true chr3: 55154859-55159302 Medicago truncatula
Medtr3g117790 2.0kb downstream 2.0kb downstream 2000 false chr3: 55157303-55159302 Medicago truncatula
Medtr3g117790 5.0kb upstream 5.0kb upstream 7444 true chr3: 55149859-55157302 Medicago truncatula
Medtr3g117790 5.0kb upstream 5.0kb upstream 5000 false chr3: 55149859-55154858 Medicago truncatula
Medtr3g117790 5.0kb downstream 5.0kb downstream 7444 true chr3: 55154859-55162302 Medicago truncatula
Medtr3g117790 5.0kb downstream 5.0kb downstream 5000 false chr3: 55157303-55162302 Medicago truncatula
Medtr3g117790 10.0kb upstream 10.0kb upstream 12444 true chr3: 55144859-55157302 Medicago truncatula
Medtr3g117790 10.0kb upstream 10.0kb upstream 10000 false chr3: 55144859-55154858 Medicago truncatula
Medtr3g117790 10.0kb downstream 10.0kb downstream 12444 true chr3: 55154859-55167302 Medicago truncatula
Medtr3g117790 10.0kb downstream 10.0kb downstream 10000 false chr3: 55157303-55167302 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296429 5265 Fabidae View MSA
124067542 5270 Rosid View MSA
123751765 5271 Pentapetalae View MSA
122796417 5272 Eudicot View MSA
122048444 5273 Angiosperm View MSA
121347141 5274 Embryophyte View MSA
123425851 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.02     Low  
cufflinks 0.084        
cufflinks 0.135        
cufflinks 0.009     Low Low
cufflinks 0.245       High
cufflinks 0.088     Low  
cufflinks 0.023     Low  
cufflinks 0.11        
cufflinks 0.019     Low  

0 Strain