Gene : Medtr3g117680 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR34574:SF2 - EF-HAND CONTAINING PROTEIN-LIKE Description:  calcium-binding EF-hand protein
Genomic Order:  6693 Name:  ? Medtr3g117680
Secondary Identifier:  ? PAC:31061447
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g117680 0.5kb upstream 0.5kb upstream 5151 true chr3: 55094384-55099534 Medicago truncatula
Medtr3g117680 0.5kb upstream 0.5kb upstream 500 false chr3: 55094384-55094883 Medicago truncatula
Medtr3g117680 0.5kb downstream 0.5kb downstream 5151 true chr3: 55094884-55100034 Medicago truncatula
Medtr3g117680 0.5kb downstream 0.5kb downstream 500 false chr3: 55099535-55100034 Medicago truncatula
Medtr3g117680 1.0kb upstream 1.0kb upstream 5651 true chr3: 55093884-55099534 Medicago truncatula
Medtr3g117680 1.0kb upstream 1.0kb upstream 1000 false chr3: 55093884-55094883 Medicago truncatula
Medtr3g117680 1.0kb downstream 1.0kb downstream 5651 true chr3: 55094884-55100534 Medicago truncatula
Medtr3g117680 1.0kb downstream 1.0kb downstream 1000 false chr3: 55099535-55100534 Medicago truncatula
Medtr3g117680 2.0kb upstream 2.0kb upstream 6651 true chr3: 55092884-55099534 Medicago truncatula
Medtr3g117680 2.0kb upstream 2.0kb upstream 2000 false chr3: 55092884-55094883 Medicago truncatula
Medtr3g117680 2.0kb downstream 2.0kb downstream 6651 true chr3: 55094884-55101534 Medicago truncatula
Medtr3g117680 2.0kb downstream 2.0kb downstream 2000 false chr3: 55099535-55101534 Medicago truncatula
Medtr3g117680 5.0kb upstream 5.0kb upstream 9651 true chr3: 55089884-55099534 Medicago truncatula
Medtr3g117680 5.0kb upstream 5.0kb upstream 5000 false chr3: 55089884-55094883 Medicago truncatula
Medtr3g117680 5.0kb downstream 5.0kb downstream 9651 true chr3: 55094884-55104534 Medicago truncatula
Medtr3g117680 5.0kb downstream 5.0kb downstream 5000 false chr3: 55099535-55104534 Medicago truncatula
Medtr3g117680 10.0kb upstream 10.0kb upstream 14651 true chr3: 55084884-55099534 Medicago truncatula
Medtr3g117680 10.0kb upstream 10.0kb upstream 10000 false chr3: 55084884-55094883 Medicago truncatula
Medtr3g117680 10.0kb downstream 10.0kb downstream 14651 true chr3: 55094884-55109534 Medicago truncatula
Medtr3g117680 10.0kb downstream 10.0kb downstream 10000 false chr3: 55099535-55109534 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314356 5265 Fabidae View MSA
124062130 5270 Rosid View MSA
123739646 5271 Pentapetalae View MSA
122789381 5272 Eudicot View MSA
122043203 5273 Angiosperm View MSA
121346779 5274 Embryophyte View MSA
123380443 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.135        
cufflinks 0.191        
cufflinks 0.154        
cufflinks 0.035     Low  
cufflinks 0.236        
cufflinks 0.004     Low Low
cufflinks 0.033     Low  
cufflinks 0.145        
cufflinks 0.07     Low  

0 Strain