Gene : Medtr3g117760 M. truncatula Mt4.0v1
Defline:  (1 of 43) PF01190 - Pollen proteins Ole e I like (Pollen_Ole_e_I) Description:  pollen Ole e I family allergens
Genomic Order:  6701 Name:  ? Medtr3g117760
Secondary Identifier:  ? PAC:31055859
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g117760 0.5kb upstream 0.5kb upstream 3010 true chr3: 55142934-55145943 Medicago truncatula
Medtr3g117760 0.5kb upstream 0.5kb upstream 500 false chr3: 55142934-55143433 Medicago truncatula
Medtr3g117760 0.5kb downstream 0.5kb downstream 3010 true chr3: 55143434-55146443 Medicago truncatula
Medtr3g117760 0.5kb downstream 0.5kb downstream 500 false chr3: 55145944-55146443 Medicago truncatula
Medtr3g117760 1.0kb upstream 1.0kb upstream 3510 true chr3: 55142434-55145943 Medicago truncatula
Medtr3g117760 1.0kb upstream 1.0kb upstream 1000 false chr3: 55142434-55143433 Medicago truncatula
Medtr3g117760 1.0kb downstream 1.0kb downstream 3510 true chr3: 55143434-55146943 Medicago truncatula
Medtr3g117760 1.0kb downstream 1.0kb downstream 1000 false chr3: 55145944-55146943 Medicago truncatula
Medtr3g117760 2.0kb upstream 2.0kb upstream 4510 true chr3: 55141434-55145943 Medicago truncatula
Medtr3g117760 2.0kb upstream 2.0kb upstream 2000 false chr3: 55141434-55143433 Medicago truncatula
Medtr3g117760 2.0kb downstream 2.0kb downstream 4510 true chr3: 55143434-55147943 Medicago truncatula
Medtr3g117760 2.0kb downstream 2.0kb downstream 2000 false chr3: 55145944-55147943 Medicago truncatula
Medtr3g117760 5.0kb upstream 5.0kb upstream 7510 true chr3: 55138434-55145943 Medicago truncatula
Medtr3g117760 5.0kb upstream 5.0kb upstream 5000 false chr3: 55138434-55143433 Medicago truncatula
Medtr3g117760 5.0kb downstream 5.0kb downstream 7510 true chr3: 55143434-55150943 Medicago truncatula
Medtr3g117760 5.0kb downstream 5.0kb downstream 5000 false chr3: 55145944-55150943 Medicago truncatula
Medtr3g117760 10.0kb upstream 10.0kb upstream 12510 true chr3: 55133434-55145943 Medicago truncatula
Medtr3g117760 10.0kb upstream 10.0kb upstream 10000 false chr3: 55133434-55143433 Medicago truncatula
Medtr3g117760 10.0kb downstream 10.0kb downstream 12510 true chr3: 55143434-55155943 Medicago truncatula
Medtr3g117760 10.0kb downstream 10.0kb downstream 10000 false chr3: 55145944-55155943 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302393 5265 Fabidae View MSA
124061296 5270 Rosid View MSA
123747098 5271 Pentapetalae View MSA
122793338 5272 Eudicot View MSA
122042133 5273 Angiosperm View MSA
121349082 5274 Embryophyte View MSA
123381156 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.159       Low
cufflinks 1.596        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.785        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.632        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain