Gene : Medtr3g117590 M. truncatula Mt4.0v1
Defline:  (1 of 2) 2.4.2.14 - Amidophosphoribosyltransferase / Phosphoribosyldiphosphate 5-amidotransferase Description:  GLN phosphoribosyl pyrophosphate amidotransferase
Genomic Order:  6684 Name:  ? Medtr3g117590
Secondary Identifier:  ? PAC:31059249
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2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Mtruncatula PWY-6121 Medicago truncatula pathologic  
Mtruncatula PWY-841 Medicago truncatula pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g117590 0.5kb upstream 0.5kb upstream 2767 true chr3: 55059923-55062689 Medicago truncatula
Medtr3g117590 0.5kb upstream 0.5kb upstream 500 false chr3: 55062190-55062689 Medicago truncatula
Medtr3g117590 0.5kb downstream 0.5kb downstream 2767 true chr3: 55059423-55062189 Medicago truncatula
Medtr3g117590 0.5kb downstream 0.5kb downstream 500 false chr3: 55059423-55059922 Medicago truncatula
Medtr3g117590 1.0kb upstream 1.0kb upstream 3267 true chr3: 55059923-55063189 Medicago truncatula
Medtr3g117590 1.0kb upstream 1.0kb upstream 1000 false chr3: 55062190-55063189 Medicago truncatula
Medtr3g117590 1.0kb downstream 1.0kb downstream 3267 true chr3: 55058923-55062189 Medicago truncatula
Medtr3g117590 1.0kb downstream 1.0kb downstream 1000 false chr3: 55058923-55059922 Medicago truncatula
Medtr3g117590 2.0kb upstream 2.0kb upstream 4267 true chr3: 55059923-55064189 Medicago truncatula
Medtr3g117590 2.0kb upstream 2.0kb upstream 2000 false chr3: 55062190-55064189 Medicago truncatula
Medtr3g117590 2.0kb downstream 2.0kb downstream 4267 true chr3: 55057923-55062189 Medicago truncatula
Medtr3g117590 2.0kb downstream 2.0kb downstream 2000 false chr3: 55057923-55059922 Medicago truncatula
Medtr3g117590 5.0kb upstream 5.0kb upstream 7267 true chr3: 55059923-55067189 Medicago truncatula
Medtr3g117590 5.0kb upstream 5.0kb upstream 5000 false chr3: 55062190-55067189 Medicago truncatula
Medtr3g117590 5.0kb downstream 5.0kb downstream 7267 true chr3: 55054923-55062189 Medicago truncatula
Medtr3g117590 5.0kb downstream 5.0kb downstream 5000 false chr3: 55054923-55059922 Medicago truncatula
Medtr3g117590 10.0kb upstream 10.0kb upstream 12267 true chr3: 55059923-55072189 Medicago truncatula
Medtr3g117590 10.0kb upstream 10.0kb upstream 10000 false chr3: 55062190-55072189 Medicago truncatula
Medtr3g117590 10.0kb downstream 10.0kb downstream 12267 true chr3: 55049923-55062189 Medicago truncatula
Medtr3g117590 10.0kb downstream 10.0kb downstream 10000 false chr3: 55049923-55059922 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296040 5265 Fabidae View MSA
124066894 5270 Rosid View MSA
123745700 5271 Pentapetalae View MSA
122790878 5272 Eudicot View MSA
122046645 5273 Angiosperm View MSA
121350725 5274 Embryophyte View MSA
123425714 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.599       Low
cufflinks 1.803        
cufflinks 3.329       High
cufflinks 1.165        
cufflinks 2.292        
cufflinks 0.937        
cufflinks 1.74        
cufflinks 2.425        
cufflinks 0.893        

0 Strain