Gene : Medtr3g117570 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR34550:SF2 - 30S RIBOSOMAL PROTEIN S31, MITOCHONDRIAL Description:  30S ribosomal protein S31
Genomic Order:  6682 Name:  ? Medtr3g117570
Secondary Identifier:  ? PAC:31059558
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g117570 0.5kb upstream 0.5kb upstream 2201 true chr3: 55049465-55051665 Medicago truncatula
Medtr3g117570 0.5kb upstream 0.5kb upstream 500 false chr3: 55051166-55051665 Medicago truncatula
Medtr3g117570 0.5kb downstream 0.5kb downstream 2201 true chr3: 55048965-55051165 Medicago truncatula
Medtr3g117570 0.5kb downstream 0.5kb downstream 500 false chr3: 55048965-55049464 Medicago truncatula
Medtr3g117570 1.0kb upstream 1.0kb upstream 2701 true chr3: 55049465-55052165 Medicago truncatula
Medtr3g117570 1.0kb upstream 1.0kb upstream 1000 false chr3: 55051166-55052165 Medicago truncatula
Medtr3g117570 1.0kb downstream 1.0kb downstream 2701 true chr3: 55048465-55051165 Medicago truncatula
Medtr3g117570 1.0kb downstream 1.0kb downstream 1000 false chr3: 55048465-55049464 Medicago truncatula
Medtr3g117570 2.0kb upstream 2.0kb upstream 3701 true chr3: 55049465-55053165 Medicago truncatula
Medtr3g117570 2.0kb upstream 2.0kb upstream 2000 false chr3: 55051166-55053165 Medicago truncatula
Medtr3g117570 2.0kb downstream 2.0kb downstream 3701 true chr3: 55047465-55051165 Medicago truncatula
Medtr3g117570 2.0kb downstream 2.0kb downstream 2000 false chr3: 55047465-55049464 Medicago truncatula
Medtr3g117570 5.0kb upstream 5.0kb upstream 6701 true chr3: 55049465-55056165 Medicago truncatula
Medtr3g117570 5.0kb upstream 5.0kb upstream 5000 false chr3: 55051166-55056165 Medicago truncatula
Medtr3g117570 5.0kb downstream 5.0kb downstream 6701 true chr3: 55044465-55051165 Medicago truncatula
Medtr3g117570 5.0kb downstream 5.0kb downstream 5000 false chr3: 55044465-55049464 Medicago truncatula
Medtr3g117570 10.0kb upstream 10.0kb upstream 11701 true chr3: 55049465-55061165 Medicago truncatula
Medtr3g117570 10.0kb upstream 10.0kb upstream 10000 false chr3: 55051166-55061165 Medicago truncatula
Medtr3g117570 10.0kb downstream 10.0kb downstream 11701 true chr3: 55039465-55051165 Medicago truncatula
Medtr3g117570 10.0kb downstream 10.0kb downstream 10000 false chr3: 55039465-55049464 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311837 5265 Fabidae View MSA
124068487 5270 Rosid View MSA
123752888 5271 Pentapetalae View MSA
122792825 5272 Eudicot View MSA
122046754 5273 Angiosperm View MSA
121345882 5274 Embryophyte View MSA
123380282 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.221        
cufflinks 3.76        
cufflinks 3.621        
cufflinks 18.224     High High
cufflinks 4.3        
cufflinks 58.147     High High
cufflinks 4.263        
cufflinks 3.132        
cufflinks 6.7        

0 Strain