Gene : Medtr3g117490 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR22884:SF374 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 19-RELATED Description:  zinc finger CCCH domain protein
Genomic Order:  6676 Name:  ? Medtr3g117490
Secondary Identifier:  ? PAC:31055999
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g117490 0.5kb upstream 0.5kb upstream 10686 true chr3: 54988347-54999032 Medicago truncatula
Medtr3g117490 0.5kb upstream 0.5kb upstream 500 false chr3: 54988347-54988846 Medicago truncatula
Medtr3g117490 0.5kb downstream 0.5kb downstream 10686 true chr3: 54988847-54999532 Medicago truncatula
Medtr3g117490 0.5kb downstream 0.5kb downstream 500 false chr3: 54999033-54999532 Medicago truncatula
Medtr3g117490 1.0kb upstream 1.0kb upstream 11186 true chr3: 54987847-54999032 Medicago truncatula
Medtr3g117490 1.0kb upstream 1.0kb upstream 1000 false chr3: 54987847-54988846 Medicago truncatula
Medtr3g117490 1.0kb downstream 1.0kb downstream 11186 true chr3: 54988847-55000032 Medicago truncatula
Medtr3g117490 1.0kb downstream 1.0kb downstream 1000 false chr3: 54999033-55000032 Medicago truncatula
Medtr3g117490 2.0kb upstream 2.0kb upstream 12186 true chr3: 54986847-54999032 Medicago truncatula
Medtr3g117490 2.0kb upstream 2.0kb upstream 2000 false chr3: 54986847-54988846 Medicago truncatula
Medtr3g117490 2.0kb downstream 2.0kb downstream 12186 true chr3: 54988847-55001032 Medicago truncatula
Medtr3g117490 2.0kb downstream 2.0kb downstream 2000 false chr3: 54999033-55001032 Medicago truncatula
Medtr3g117490 5.0kb upstream 5.0kb upstream 15186 true chr3: 54983847-54999032 Medicago truncatula
Medtr3g117490 5.0kb upstream 5.0kb upstream 5000 false chr3: 54983847-54988846 Medicago truncatula
Medtr3g117490 5.0kb downstream 5.0kb downstream 15186 true chr3: 54988847-55004032 Medicago truncatula
Medtr3g117490 5.0kb downstream 5.0kb downstream 5000 false chr3: 54999033-55004032 Medicago truncatula
Medtr3g117490 10.0kb upstream 10.0kb upstream 20186 true chr3: 54978847-54999032 Medicago truncatula
Medtr3g117490 10.0kb upstream 10.0kb upstream 10000 false chr3: 54978847-54988846 Medicago truncatula
Medtr3g117490 10.0kb downstream 10.0kb downstream 20186 true chr3: 54988847-55009032 Medicago truncatula
Medtr3g117490 10.0kb downstream 10.0kb downstream 10000 false chr3: 54999033-55009032 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303325 5265 Fabidae View MSA
124066168 5270 Rosid View MSA
123753023 5271 Pentapetalae View MSA
122797063 5272 Eudicot View MSA
122044287 5273 Angiosperm View MSA
121348598 5274 Embryophyte View MSA
123380932 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.102        
cufflinks 6.704        
cufflinks 7.903        
cufflinks 2.471       Low
cufflinks 8.599       High
cufflinks 2.676       Low
cufflinks 5.253        
cufflinks 7.013        
cufflinks 3.582        

0 Strain