Gene : Medtr3g109210 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11599:SF4 - PROTEASOME SUBUNIT BETA TYPE Description:  proteasome subunit beta protein
Genomic Order:  6086 Name:  ? Medtr3g109210
Secondary Identifier:  ? PAC:31056412
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g109210 0.5kb upstream 0.5kb upstream 4149 true chr3: 50489857-50494005 Medicago truncatula
Medtr3g109210 0.5kb upstream 0.5kb upstream 500 false chr3: 50493506-50494005 Medicago truncatula
Medtr3g109210 0.5kb downstream 0.5kb downstream 4149 true chr3: 50489357-50493505 Medicago truncatula
Medtr3g109210 0.5kb downstream 0.5kb downstream 500 false chr3: 50489357-50489856 Medicago truncatula
Medtr3g109210 1.0kb upstream 1.0kb upstream 4649 true chr3: 50489857-50494505 Medicago truncatula
Medtr3g109210 1.0kb upstream 1.0kb upstream 1000 false chr3: 50493506-50494505 Medicago truncatula
Medtr3g109210 1.0kb downstream 1.0kb downstream 4649 true chr3: 50488857-50493505 Medicago truncatula
Medtr3g109210 1.0kb downstream 1.0kb downstream 1000 false chr3: 50488857-50489856 Medicago truncatula
Medtr3g109210 2.0kb upstream 2.0kb upstream 5649 true chr3: 50489857-50495505 Medicago truncatula
Medtr3g109210 2.0kb upstream 2.0kb upstream 2000 false chr3: 50493506-50495505 Medicago truncatula
Medtr3g109210 2.0kb downstream 2.0kb downstream 5649 true chr3: 50487857-50493505 Medicago truncatula
Medtr3g109210 2.0kb downstream 2.0kb downstream 2000 false chr3: 50487857-50489856 Medicago truncatula
Medtr3g109210 5.0kb upstream 5.0kb upstream 8649 true chr3: 50489857-50498505 Medicago truncatula
Medtr3g109210 5.0kb upstream 5.0kb upstream 5000 false chr3: 50493506-50498505 Medicago truncatula
Medtr3g109210 5.0kb downstream 5.0kb downstream 8649 true chr3: 50484857-50493505 Medicago truncatula
Medtr3g109210 5.0kb downstream 5.0kb downstream 5000 false chr3: 50484857-50489856 Medicago truncatula
Medtr3g109210 10.0kb upstream 10.0kb upstream 13649 true chr3: 50489857-50503505 Medicago truncatula
Medtr3g109210 10.0kb upstream 10.0kb upstream 10000 false chr3: 50493506-50503505 Medicago truncatula
Medtr3g109210 10.0kb downstream 10.0kb downstream 13649 true chr3: 50479857-50493505 Medicago truncatula
Medtr3g109210 10.0kb downstream 10.0kb downstream 10000 false chr3: 50479857-50489856 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308498 5265 Fabidae View MSA
124072118 5270 Rosid View MSA
123739837 5271 Pentapetalae View MSA
122787112 5272 Eudicot View MSA
122042540 5273 Angiosperm View MSA
121348107 5274 Embryophyte View MSA
123423963 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.921     High Low
cufflinks 23.4     High  
cufflinks 20.101     High  
cufflinks 60.641     High High
cufflinks 23.818     High  
cufflinks 51.306     High High
cufflinks 22.082     High  
cufflinks 19.731     High  
cufflinks 42.159     High  

0 Strain