Gene : Medtr3g109310 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR22952//PTHR22952:SF113 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Description:  BZIP transcription factor
Genomic Order:  6095 Name:  ? Medtr3g109310
Secondary Identifier:  ? PAC:31059214
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g109310 0.5kb upstream 0.5kb upstream 4935 true chr3: 50550606-50555540 Medicago truncatula
Medtr3g109310 0.5kb upstream 0.5kb upstream 500 false chr3: 50550606-50551105 Medicago truncatula
Medtr3g109310 0.5kb downstream 0.5kb downstream 4935 true chr3: 50551106-50556040 Medicago truncatula
Medtr3g109310 0.5kb downstream 0.5kb downstream 500 false chr3: 50555541-50556040 Medicago truncatula
Medtr3g109310 1.0kb upstream 1.0kb upstream 5435 true chr3: 50550106-50555540 Medicago truncatula
Medtr3g109310 1.0kb upstream 1.0kb upstream 1000 false chr3: 50550106-50551105 Medicago truncatula
Medtr3g109310 1.0kb downstream 1.0kb downstream 5435 true chr3: 50551106-50556540 Medicago truncatula
Medtr3g109310 1.0kb downstream 1.0kb downstream 1000 false chr3: 50555541-50556540 Medicago truncatula
Medtr3g109310 2.0kb upstream 2.0kb upstream 6435 true chr3: 50549106-50555540 Medicago truncatula
Medtr3g109310 2.0kb upstream 2.0kb upstream 2000 false chr3: 50549106-50551105 Medicago truncatula
Medtr3g109310 2.0kb downstream 2.0kb downstream 6435 true chr3: 50551106-50557540 Medicago truncatula
Medtr3g109310 2.0kb downstream 2.0kb downstream 2000 false chr3: 50555541-50557540 Medicago truncatula
Medtr3g109310 5.0kb upstream 5.0kb upstream 9435 true chr3: 50546106-50555540 Medicago truncatula
Medtr3g109310 5.0kb upstream 5.0kb upstream 5000 false chr3: 50546106-50551105 Medicago truncatula
Medtr3g109310 5.0kb downstream 5.0kb downstream 9435 true chr3: 50551106-50560540 Medicago truncatula
Medtr3g109310 5.0kb downstream 5.0kb downstream 5000 false chr3: 50555541-50560540 Medicago truncatula
Medtr3g109310 10.0kb upstream 10.0kb upstream 14435 true chr3: 50541106-50555540 Medicago truncatula
Medtr3g109310 10.0kb upstream 10.0kb upstream 10000 false chr3: 50541106-50551105 Medicago truncatula
Medtr3g109310 10.0kb downstream 10.0kb downstream 14435 true chr3: 50551106-50565540 Medicago truncatula
Medtr3g109310 10.0kb downstream 10.0kb downstream 10000 false chr3: 50555541-50565540 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029163 5273 Angiosperm View MSA
122312182 5265 Fabidae View MSA
124062967 5270 Rosid View MSA
123747732 5271 Pentapetalae View MSA
122794989 5272 Eudicot View MSA
123428913 5275 Viridiplantae View MSA
121298544 5274 Embryophyte View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.624        
cufflinks 1.964        
cufflinks 1.4        
cufflinks 7.816       High
cufflinks 1.507        
cufflinks 5.702        
cufflinks 7.65       High
cufflinks 1.533        
cufflinks 9.303       High

0 Strain