Gene : Medtr3g109010 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10961 - PEROXISOMAL SARCOSINE OXIDASE Description:  monomeric form sarcosine oxidase
Genomic Order:  6071 Name:  ? Medtr3g109010
Secondary Identifier:  ? PAC:31056683
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g109010 0.5kb upstream 0.5kb upstream 3933 true chr3: 50376657-50380589 Medicago truncatula
Medtr3g109010 0.5kb upstream 0.5kb upstream 500 false chr3: 50380090-50380589 Medicago truncatula
Medtr3g109010 0.5kb downstream 0.5kb downstream 3933 true chr3: 50376157-50380089 Medicago truncatula
Medtr3g109010 0.5kb downstream 0.5kb downstream 500 false chr3: 50376157-50376656 Medicago truncatula
Medtr3g109010 1.0kb upstream 1.0kb upstream 4433 true chr3: 50376657-50381089 Medicago truncatula
Medtr3g109010 1.0kb upstream 1.0kb upstream 1000 false chr3: 50380090-50381089 Medicago truncatula
Medtr3g109010 1.0kb downstream 1.0kb downstream 4433 true chr3: 50375657-50380089 Medicago truncatula
Medtr3g109010 1.0kb downstream 1.0kb downstream 1000 false chr3: 50375657-50376656 Medicago truncatula
Medtr3g109010 2.0kb upstream 2.0kb upstream 5433 true chr3: 50376657-50382089 Medicago truncatula
Medtr3g109010 2.0kb upstream 2.0kb upstream 2000 false chr3: 50380090-50382089 Medicago truncatula
Medtr3g109010 2.0kb downstream 2.0kb downstream 5433 true chr3: 50374657-50380089 Medicago truncatula
Medtr3g109010 2.0kb downstream 2.0kb downstream 2000 false chr3: 50374657-50376656 Medicago truncatula
Medtr3g109010 5.0kb upstream 5.0kb upstream 8433 true chr3: 50376657-50385089 Medicago truncatula
Medtr3g109010 5.0kb upstream 5.0kb upstream 5000 false chr3: 50380090-50385089 Medicago truncatula
Medtr3g109010 5.0kb downstream 5.0kb downstream 8433 true chr3: 50371657-50380089 Medicago truncatula
Medtr3g109010 5.0kb downstream 5.0kb downstream 5000 false chr3: 50371657-50376656 Medicago truncatula
Medtr3g109010 10.0kb upstream 10.0kb upstream 13433 true chr3: 50376657-50390089 Medicago truncatula
Medtr3g109010 10.0kb upstream 10.0kb upstream 10000 false chr3: 50380090-50390089 Medicago truncatula
Medtr3g109010 10.0kb downstream 10.0kb downstream 13433 true chr3: 50366657-50380089 Medicago truncatula
Medtr3g109010 10.0kb downstream 10.0kb downstream 10000 false chr3: 50366657-50376656 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122295520 5265 Fabidae View MSA
124067197 5270 Rosid View MSA
123745961 5271 Pentapetalae View MSA
122793788 5272 Eudicot View MSA
122051106 5273 Angiosperm View MSA
121351535 5274 Embryophyte View MSA
123427900 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.787        
cufflinks 2.814        
cufflinks 2.718        
cufflinks 2.499        
cufflinks 3.079        
cufflinks 0.495       Low
cufflinks 1.778        
cufflinks 2.797        
cufflinks 2.477        

0 Strain