Gene : Medtr3g108990 M. truncatula Mt4.0v1
Defline:  (1 of 2) PTHR10961 - PEROXISOMAL SARCOSINE OXIDASE Description:  monomeric form sarcosine oxidase
Genomic Order:  6069 Name:  ? Medtr3g108990
Secondary Identifier:  ? PAC:31056532
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g108990 0.5kb upstream 0.5kb upstream 1953 true chr3: 50368525-50370477 Medicago truncatula
Medtr3g108990 0.5kb upstream 0.5kb upstream 500 false chr3: 50369978-50370477 Medicago truncatula
Medtr3g108990 0.5kb downstream 0.5kb downstream 1953 true chr3: 50368025-50369977 Medicago truncatula
Medtr3g108990 0.5kb downstream 0.5kb downstream 500 false chr3: 50368025-50368524 Medicago truncatula
Medtr3g108990 1.0kb upstream 1.0kb upstream 2453 true chr3: 50368525-50370977 Medicago truncatula
Medtr3g108990 1.0kb upstream 1.0kb upstream 1000 false chr3: 50369978-50370977 Medicago truncatula
Medtr3g108990 1.0kb downstream 1.0kb downstream 2453 true chr3: 50367525-50369977 Medicago truncatula
Medtr3g108990 1.0kb downstream 1.0kb downstream 1000 false chr3: 50367525-50368524 Medicago truncatula
Medtr3g108990 2.0kb upstream 2.0kb upstream 3453 true chr3: 50368525-50371977 Medicago truncatula
Medtr3g108990 2.0kb upstream 2.0kb upstream 2000 false chr3: 50369978-50371977 Medicago truncatula
Medtr3g108990 2.0kb downstream 2.0kb downstream 3453 true chr3: 50366525-50369977 Medicago truncatula
Medtr3g108990 2.0kb downstream 2.0kb downstream 2000 false chr3: 50366525-50368524 Medicago truncatula
Medtr3g108990 5.0kb upstream 5.0kb upstream 6453 true chr3: 50368525-50374977 Medicago truncatula
Medtr3g108990 5.0kb upstream 5.0kb upstream 5000 false chr3: 50369978-50374977 Medicago truncatula
Medtr3g108990 5.0kb downstream 5.0kb downstream 6453 true chr3: 50363525-50369977 Medicago truncatula
Medtr3g108990 5.0kb downstream 5.0kb downstream 5000 false chr3: 50363525-50368524 Medicago truncatula
Medtr3g108990 10.0kb upstream 10.0kb upstream 11453 true chr3: 50368525-50379977 Medicago truncatula
Medtr3g108990 10.0kb upstream 10.0kb upstream 10000 false chr3: 50369978-50379977 Medicago truncatula
Medtr3g108990 10.0kb downstream 10.0kb downstream 11453 true chr3: 50358525-50369977 Medicago truncatula
Medtr3g108990 10.0kb downstream 10.0kb downstream 10000 false chr3: 50358525-50368524 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301147 5265 Fabidae View MSA
124067197 5270 Rosid View MSA
123745961 5271 Pentapetalae View MSA
122793788 5272 Eudicot View MSA
122051106 5273 Angiosperm View MSA
121351535 5274 Embryophyte View MSA
123427900 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.081       Low
cufflinks 0.897        
cufflinks 0.651        
cufflinks 10.687     High High
cufflinks 0.861        
cufflinks 7.158       High
cufflinks 2.48        
cufflinks 0.642        
cufflinks 5.173        

0 Strain