Gene : Medtr3g108900 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR11717:SF2 - PEPTIDYL-TRNA HYDROLASE PTRHD1-RELATED Description:  type 2 (PTH2)-like peptidyl-tRNA hydrolase
Genomic Order:  6060 Name:  ? Medtr3g108900
Secondary Identifier:  ? PAC:31057911
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g108900 0.5kb upstream 0.5kb upstream 4394 true chr3: 50326673-50331066 Medicago truncatula
Medtr3g108900 0.5kb upstream 0.5kb upstream 500 false chr3: 50330567-50331066 Medicago truncatula
Medtr3g108900 0.5kb downstream 0.5kb downstream 4394 true chr3: 50326173-50330566 Medicago truncatula
Medtr3g108900 0.5kb downstream 0.5kb downstream 500 false chr3: 50326173-50326672 Medicago truncatula
Medtr3g108900 1.0kb upstream 1.0kb upstream 4894 true chr3: 50326673-50331566 Medicago truncatula
Medtr3g108900 1.0kb upstream 1.0kb upstream 1000 false chr3: 50330567-50331566 Medicago truncatula
Medtr3g108900 1.0kb downstream 1.0kb downstream 4894 true chr3: 50325673-50330566 Medicago truncatula
Medtr3g108900 1.0kb downstream 1.0kb downstream 1000 false chr3: 50325673-50326672 Medicago truncatula
Medtr3g108900 2.0kb upstream 2.0kb upstream 5894 true chr3: 50326673-50332566 Medicago truncatula
Medtr3g108900 2.0kb upstream 2.0kb upstream 2000 false chr3: 50330567-50332566 Medicago truncatula
Medtr3g108900 2.0kb downstream 2.0kb downstream 5894 true chr3: 50324673-50330566 Medicago truncatula
Medtr3g108900 2.0kb downstream 2.0kb downstream 2000 false chr3: 50324673-50326672 Medicago truncatula
Medtr3g108900 5.0kb upstream 5.0kb upstream 8894 true chr3: 50326673-50335566 Medicago truncatula
Medtr3g108900 5.0kb upstream 5.0kb upstream 5000 false chr3: 50330567-50335566 Medicago truncatula
Medtr3g108900 5.0kb downstream 5.0kb downstream 8894 true chr3: 50321673-50330566 Medicago truncatula
Medtr3g108900 5.0kb downstream 5.0kb downstream 5000 false chr3: 50321673-50326672 Medicago truncatula
Medtr3g108900 10.0kb upstream 10.0kb upstream 13894 true chr3: 50326673-50340566 Medicago truncatula
Medtr3g108900 10.0kb upstream 10.0kb upstream 10000 false chr3: 50330567-50340566 Medicago truncatula
Medtr3g108900 10.0kb downstream 10.0kb downstream 13894 true chr3: 50316673-50330566 Medicago truncatula
Medtr3g108900 10.0kb downstream 10.0kb downstream 10000 false chr3: 50316673-50326672 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303371 5265 Fabidae View MSA
124065557 5270 Rosid View MSA
123751866 5271 Pentapetalae View MSA
122787633 5272 Eudicot View MSA
122042660 5273 Angiosperm View MSA
121347081 5274 Embryophyte View MSA
123425673 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.703        
cufflinks 1.635       Low
cufflinks 1.648       Low
cufflinks 6.563       High
cufflinks 1.843        
cufflinks 3.443        
cufflinks 3.064        
cufflinks 1.847        
cufflinks 4.024        

0 Strain