Gene : Medtr3g109330 M. truncatula Mt4.0v1
Defline:  (1 of 17) KOG1003 - Actin filament-coating protein tropomyosin Description:  myosin heavy chain-like protein
Genomic Order:  6097 Name:  ? Medtr3g109330
Secondary Identifier:  ? PAC:31054858
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g109330 0.5kb upstream 0.5kb upstream 7093 true chr3: 50570607-50577699 Medicago truncatula
Medtr3g109330 0.5kb upstream 0.5kb upstream 500 false chr3: 50570607-50571106 Medicago truncatula
Medtr3g109330 0.5kb downstream 0.5kb downstream 7093 true chr3: 50571107-50578199 Medicago truncatula
Medtr3g109330 0.5kb downstream 0.5kb downstream 500 false chr3: 50577700-50578199 Medicago truncatula
Medtr3g109330 1.0kb upstream 1.0kb upstream 7593 true chr3: 50570107-50577699 Medicago truncatula
Medtr3g109330 1.0kb upstream 1.0kb upstream 1000 false chr3: 50570107-50571106 Medicago truncatula
Medtr3g109330 1.0kb downstream 1.0kb downstream 7593 true chr3: 50571107-50578699 Medicago truncatula
Medtr3g109330 1.0kb downstream 1.0kb downstream 1000 false chr3: 50577700-50578699 Medicago truncatula
Medtr3g109330 2.0kb upstream 2.0kb upstream 8593 true chr3: 50569107-50577699 Medicago truncatula
Medtr3g109330 2.0kb upstream 2.0kb upstream 2000 false chr3: 50569107-50571106 Medicago truncatula
Medtr3g109330 2.0kb downstream 2.0kb downstream 8593 true chr3: 50571107-50579699 Medicago truncatula
Medtr3g109330 2.0kb downstream 2.0kb downstream 2000 false chr3: 50577700-50579699 Medicago truncatula
Medtr3g109330 5.0kb upstream 5.0kb upstream 11593 true chr3: 50566107-50577699 Medicago truncatula
Medtr3g109330 5.0kb upstream 5.0kb upstream 5000 false chr3: 50566107-50571106 Medicago truncatula
Medtr3g109330 5.0kb downstream 5.0kb downstream 11593 true chr3: 50571107-50582699 Medicago truncatula
Medtr3g109330 5.0kb downstream 5.0kb downstream 5000 false chr3: 50577700-50582699 Medicago truncatula
Medtr3g109330 10.0kb upstream 10.0kb upstream 16593 true chr3: 50561107-50577699 Medicago truncatula
Medtr3g109330 10.0kb upstream 10.0kb upstream 10000 false chr3: 50561107-50571106 Medicago truncatula
Medtr3g109330 10.0kb downstream 10.0kb downstream 16593 true chr3: 50571107-50587699 Medicago truncatula
Medtr3g109330 10.0kb downstream 10.0kb downstream 10000 false chr3: 50577700-50587699 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304734 5265 Fabidae View MSA
124066395 5270 Rosid View MSA
123740440 5271 Pentapetalae View MSA
122788367 5272 Eudicot View MSA
122044616 5273 Angiosperm View MSA
121349321 5274 Embryophyte View MSA
123381277 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.456       Low
cufflinks 3.485        
cufflinks 3.687        
cufflinks 4.787        
cufflinks 4.631        
cufflinks 1.899       Low
cufflinks 4.093        
cufflinks 3.202        
cufflinks 5.271       High

0 Strain