Gene : Medtr3g110068 M. truncatula Mt4.0v1
Defline:  (1 of 1) PTHR13242 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 Description:  RNA polymerase I-associated factor PAF67
Genomic Order:  6160 Name:  ? Medtr3g110068
Secondary Identifier:  ? PAC:31053688
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Medtr3g110068 0.5kb upstream 0.5kb upstream 4966 true chr3: 50948786-50953751 Medicago truncatula
Medtr3g110068 0.5kb upstream 0.5kb upstream 500 false chr3: 50953252-50953751 Medicago truncatula
Medtr3g110068 0.5kb downstream 0.5kb downstream 4966 true chr3: 50948286-50953251 Medicago truncatula
Medtr3g110068 0.5kb downstream 0.5kb downstream 500 false chr3: 50948286-50948785 Medicago truncatula
Medtr3g110068 1.0kb upstream 1.0kb upstream 5466 true chr3: 50948786-50954251 Medicago truncatula
Medtr3g110068 1.0kb upstream 1.0kb upstream 1000 false chr3: 50953252-50954251 Medicago truncatula
Medtr3g110068 1.0kb downstream 1.0kb downstream 5466 true chr3: 50947786-50953251 Medicago truncatula
Medtr3g110068 1.0kb downstream 1.0kb downstream 1000 false chr3: 50947786-50948785 Medicago truncatula
Medtr3g110068 2.0kb upstream 2.0kb upstream 6466 true chr3: 50948786-50955251 Medicago truncatula
Medtr3g110068 2.0kb upstream 2.0kb upstream 2000 false chr3: 50953252-50955251 Medicago truncatula
Medtr3g110068 2.0kb downstream 2.0kb downstream 6466 true chr3: 50946786-50953251 Medicago truncatula
Medtr3g110068 2.0kb downstream 2.0kb downstream 2000 false chr3: 50946786-50948785 Medicago truncatula
Medtr3g110068 5.0kb upstream 5.0kb upstream 9466 true chr3: 50948786-50958251 Medicago truncatula
Medtr3g110068 5.0kb upstream 5.0kb upstream 5000 false chr3: 50953252-50958251 Medicago truncatula
Medtr3g110068 5.0kb downstream 5.0kb downstream 9466 true chr3: 50943786-50953251 Medicago truncatula
Medtr3g110068 5.0kb downstream 5.0kb downstream 5000 false chr3: 50943786-50948785 Medicago truncatula
Medtr3g110068 10.0kb upstream 10.0kb upstream 14466 true chr3: 50948786-50963251 Medicago truncatula
Medtr3g110068 10.0kb upstream 10.0kb upstream 10000 false chr3: 50953252-50963251 Medicago truncatula
Medtr3g110068 10.0kb downstream 10.0kb downstream 14466 true chr3: 50938786-50953251 Medicago truncatula
Medtr3g110068 10.0kb downstream 10.0kb downstream 10000 false chr3: 50938786-50948785 Medicago truncatula

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299776 5265 Fabidae View MSA
124061096 5270 Rosid View MSA
123737176 5271 Pentapetalae View MSA
122792721 5272 Eudicot View MSA
122045359 5273 Angiosperm View MSA
121350226 5274 Embryophyte View MSA
123425035 5275 Viridiplantae View MSA

9 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.579     High  
cufflinks 15.44     High  
cufflinks 13.879     High  
cufflinks 15.495     High  
cufflinks 23.033     High High
cufflinks 7.541       Low
cufflinks 13.692     High  
cufflinks 15.061     High  
cufflinks 20.744     High High

0 Strain